miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00593;snoU83B;AADN02006114.1/6020-6112 9031:Gallus gallus
(chicken)
Length = 93
Score = 149 bits (75), Expect = 6e-36
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 gcagttcggtgatgaaaccatggaataagcgctgggcacagcgcctgacatccgtgagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagttcggtgatgaaaccatggaataagcgctgggcacagcgcctgacatccgtgagga 60
Query: 61 gtcgttccatgctgc 75
|||||||||||||||
Sbjct: 61 gtcgttccatgctgc 75
>RF00593;snoU83B;AAFR03059474.1/49781-49873 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 93
Score = 60.0 bits (30), Expect = 4e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 4 gttcggtgatgaaaccatggaataagcgctgggcacagcgcc 45
|||| |||||||| |||||||||||||||||||||||||||
Sbjct: 4 gttcagtgatgaagtcatggaataagcgctgggcacagcgcc 45
>RF00593;snoU83B;AAWZ01020173.1/81834-81927 28377:Anolis
carolinensis (green anole)
Length = 94
Score = 50.1 bits (25), Expect = 4e-06
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 4 gttcggtgatgaaaccatggaataagcgctgggcacagcgcctgaca-tccgtgaggagt 62
|||| ||||||| | ||||||||| || |||||||||| |||||| | | ||||||||
Sbjct: 4 gttcagtgatgagatcatggaatatgcactgggcacagtgcctgataataaatgaggagt 63
Query: 63 cgttccatgctgc 75
|||||||||||||
Sbjct: 64 cgttccatgctgc 76
>RF00593;snoU83B;ABRQ01277690.1/905-998 9813:Procavia capensis
(cape rock hyrax)
Length = 94
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tggaataagcgctgggcacagcgcc 45
|||||| ||||||||||||||||||
Sbjct: 21 tggaatgagcgctgggcacagcgcc 45
