miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00694;mir-137;AADN02012896.1/32588-32489 9031:Gallus gallus
(chicken)
Length = 100
Score = 145 bits (73), Expect = 8e-35
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 ggtgacgggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 ggtgacgggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcg 77
Query: 61 tagtcgaggagag 73
|||||||||||||
Sbjct: 78 tagtcgaggagag 90
>RF00694;mir-137;ABRO01064648.1/7203-7302 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 100
Score = 129 bits (65), Expect = 5e-30
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 ggtgacgggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcg 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 18 ggtgacgggtattcttgggtggataatacggattacgttgttatagcttaagaatacgtg 77
Query: 61 tagtcgaggagag 73
|||||||||||||
Sbjct: 78 tagtcgaggagag 90
>RF00694;mir-137;BAAE01237923.1/971-872 8090:Oryzias latipes
(Japanese medaka)
Length = 100
Score = 129 bits (65), Expect = 5e-30
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 ggtgacgggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcg 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 18 ggtgacgggtattcttgggtggataatacggatcacgttgttattgcttaagaatacgcg 77
Query: 61 tagtcgaggagag 73
|||| ||||||||
Sbjct: 78 tagttgaggagag 90
>RF00694;mir-137;AL929343.7/129004-128905 7955:Danio rerio
(zebrafish)
Length = 100
Score = 121 bits (61), Expect = 1e-27
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 1 ggtgacgggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcg 60
||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 18 ggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaagaatacgcg 77
Query: 61 tagtcgaggagag 73
|||||||||||||
Sbjct: 78 tagtcgaggagag 90
>RF00694;mir-137;CAAK05033301.1/18518-18419 7955:Danio rerio
(zebrafish)
Length = 100
Score = 113 bits (57), Expect = 3e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 1 ggtgacgggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcg 60
||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 18 ggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaagaatacgcg 77
Query: 61 tagtcgaggagag 73
|||| ||||||||
Sbjct: 78 tagttgaggagag 90
>RF00694;mir-137;AAPN01296459.1/4449-4348 9258:Ornithorhynchus
anatinus (platypus)
Length = 102
Score = 85.7 bits (43), Expect = 7e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 3 tgacgggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcgta 62
|||||||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 20 tgacgggtattcttgggtacataatacggatggcgctgttattgcttgagaatacgcgta 79
Query: 63 gtcgagg 69
|||||||
Sbjct: 80 gtcgagg 86
>RF00694;mir-137;AJ324266.1/117-18 9606:Homo sapiens (human)
Length = 100
Score = 83.8 bits (42), Expect = 3e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 1 ggtgacgggtattcttgggtggataatacggattacgttgttattgcttaagaatacg 58
||||||||||||||||||||||||||| ||||| |||||||||| | |||||||||||
Sbjct: 18 ggtgacgggtattcttgggtggataatccggatgacgttgttatggtttaagaatacg 75
>RF00694;mir-137;AAWZ01010620.1/48359-48459 28377:Anolis
carolinensis (green anole)
Length = 101
Score = 73.8 bits (37), Expect = 3e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 5 acgggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcgtagt 64
|||||||||||||||| ||||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 22 acgggtattcttgggtatataatacagatggcgttgttattgcttgagaatacgcgtagt 81
Query: 65 cgagg 69
||||
Sbjct: 82 tgagg 86
>RF00694;mir-137;CAAE01013623.1/560-657 99883:Tetraodon
nigroviridis
Length = 98
Score = 71.9 bits (36), Expect = 1e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 5 acgggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcgtagt 64
|||||||||||||||| |||||||| ||| | ||||||||||| ||||||||||||||
Sbjct: 22 acgggtattcttgggttgataatacagatgtggatgttattgcttgagaatacgcgtagt 81
Query: 65 cgag 68
||||
Sbjct: 82 cgag 85
>RF00694;mir-137;ABPK01025702.1/584-484 57307:Labeotropheus
fuelleborni
Length = 101
Score = 71.9 bits (36), Expect = 1e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 5 acgggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcgtagt 64
|||||||||||||||| |||||||| ||| | ||||||||||| ||||||||||||||
Sbjct: 23 acgggtattcttgggttgataatacagatgtggatgttattgcttgagaatacgcgtagt 82
Query: 65 cgag 68
||||
Sbjct: 83 cgag 86
>RF00694;mir-137;BAAF04031315.1/5933-5836 8090:Oryzias latipes
(Japanese medaka)
Length = 98
Score = 71.9 bits (36), Expect = 1e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 5 acgggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcgtagt 64
|||||||||||||||| |||||||| ||| | ||||||||||| ||||||||||||||
Sbjct: 22 acgggtattcttgggttgataatacagatatggatgttattgcttgagaatacgcgtagt 81
Query: 65 cgag 68
||||
Sbjct: 82 cgag 85
>RF00694;mir-137;AAFR03049204.1/9121-9021 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 101
Score = 69.9 bits (35), Expect = 4e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 3 tgacgggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcgta 62
|||||||||||||||||| |||||||| || || ||||||||||| ||||||| ||||
Sbjct: 20 tgacgggtattcttgggtagataataccaatggcgctgttattgcttgagaatacacgta 79
Query: 63 gtcgagg 69
|||||||
Sbjct: 80 gtcgagg 86
>RF00694;mir-137;BAAF04063265.1/5995-5897 8090:Oryzias latipes
(Japanese medaka)
Length = 99
Score = 69.9 bits (35), Expect = 4e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 5 acgggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcgtag 63
|||||||||||||||| |||||||| ||| || ||||||||||| |||||||||||||
Sbjct: 22 acgggtattcttgggttgataatacagatgtcgatgttattgcttgagaatacgcgtag 80
>RF00694;mir-137;ABVD01008873.1/1869-1971 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 103
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 2 gtgacgggtattcttgggtggataatacggattac 36
||||||| |||||||||||||||||||||||||||
Sbjct: 19 gtgacggatattcttgggtggataatacggattac 53
