miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00750;mir-458;ABQF01020326.1/152-229 59729:Taeniopygia guttata
Length = 78
Score = 155 bits (78), Expect = 1e-37
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 2 gtgccgatgacagcgccatttccagagctatcaacagtgtcattgtcatagctcttggaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgccgatgacagcgccatttccagagctatcaacagtgtcattgtcatagctcttggaa 60
Query: 62 tggttctgccataagcac 79
||||||||||||||||||
Sbjct: 61 tggttctgccataagcac 78
>RF00750;mir-458;AADN02066998.1/215-292 9031:Gallus gallus
(chicken)
Length = 78
Score = 89.7 bits (45), Expect = 5e-18
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 2 gtgccgatgacagcgccatttccagagctatcaacagtgtcattgtcatagctcttggaa 61
|||| |||| ||||||||||| ||||||||| ||||| |||||||||||||||||| |||
Sbjct: 1 gtgcagatggcagcgccattttcagagctataaacagcgtcattgtcatagctctttgaa 60
Query: 62 tggttctgccata 74
|||| ||||||||
Sbjct: 61 tggtactgccata 73
>RF00750;mir-458;BX322629.8/12571-12494 7955:Danio rerio
(zebrafish)
Length = 78
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 ttgtcatagctcttggaatggttctgccataagcac 79
|||||||||||||| ||||||| |||||||| ||||
Sbjct: 43 ttgtcatagctctttgaatggtactgccatatgcac 78
