miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00253;mir-101;AADN02012457.1/2688-2762 9031:Gallus gallus
(chicken)
Length = 75
Score = 85.7 bits (43), Expect = 5e-17
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 1 agttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactga 55
|||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 12 agttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactga 66
>RF00253;mir-101;BAAF04077052.1/5406-5332 8090:Oryzias latipes
(Japanese medaka)
Length = 75
Score = 61.9 bits (31), Expect = 7e-10
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 1 agttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactga 55
||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 12 agttatcacagtgctgatgctgtccccatagaaggtacagtactgtgataactga 66
>RF00253;mir-101;AADN02066347.1/1501-1427 9031:Gallus gallus
(chicken)
Length = 75
Score = 50.1 bits (25), Expect = 3e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 31 aaaggtacagtactgtgataactga 55
|||||||||||||||||||||||||
Sbjct: 42 aaaggtacagtactgtgataactga 66
>RF00253;mir-101;AC120147.8/122464-122390 10090:Mus musculus
(house mouse)
Length = 75
Score = 42.1 bits (21), Expect = 6e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 31 aaaggtacagtactgtgataactga 55
|||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgatagctga 66
