miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;ABRL01001248.1/28987-28884 65489:Oryza barthii
Length = 104
Score = 48.1 bits (24), Expect = 8e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 281 taatatggaacggagggagtacaa 304
||||||||||||||||||||||||
Sbjct: 25 taatatggaacggagggagtacaa 2
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 48.1 bits (24), Expect = 8e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 ttatactccctccgtttcatatta 34
||||||||||||||||||||||||
Sbjct: 2 ttatactccctccgtttcatatta 25
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 12 tatactccctccgtttcatatta 34
|||||||||||||||||||||||
Sbjct: 162 tatactccctccgtttcatatta 140
