miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02003495.1/21560-21672 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 14 atactccctccgtccccgaaaaaatcaattcctag 48
|||||||||||||||| |||||||||| ||||||
Sbjct: 110 atactccctccgtcccataaaaaatcaaatcctag 76
>RF00906;MIR1122;AP008217.1/3396232-3396120 39947:Oryza sativa
Japonica Group
Length = 113
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgtccccgaaaaaatcaa 41
||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtcccagaaaaaatcaa 31
>RF00906;MIR1122;AAAA02030830.1/874-986 39946:Oryza sativa Indica
Group
Length = 113
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgtccccgaaaaaatcaa 41
||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtcccagaaaaaatcaa 31
