miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00253;mir-101;AADN02012457.1/2688-2762 9031:Gallus gallus
(chicken)
Length = 75
Score = 93.7 bits (47), Expect = 2e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 9 ctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactgaa 67
>RF00253;mir-101;BAAF04077052.1/5406-5332 8090:Oryzias latipes
(Japanese medaka)
Length = 75
Score = 60.0 bits (30), Expect = 3e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 2 tcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
|||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 10 tcagttatcacagtgctgatgctgtccccatagaaggtacagtactgtgataactgaa 67
>RF00253;mir-101;AADN02066347.1/1501-1427 9031:Gallus gallus
(chicken)
Length = 75
Score = 52.0 bits (26), Expect = 7e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactgaa 59
||||||||||||||||||||||||||
Sbjct: 42 aaaggtacagtactgtgataactgaa 67
>RF00253;mir-101;AC120147.8/122464-122390 10090:Mus musculus
(house mouse)
Length = 75
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 34 aaaggtacagtactgtgataactgaa 59
|||||||||||||||||||| |||||
Sbjct: 42 aaaggtacagtactgtgatagctgaa 67
