miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00241;mir-8;ABRQ01038381.1/1702-1622 9813:Procavia capensis
(cape rock hyrax)
Length = 81
Score = 127 bits (64), Expect = 2e-29
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 5 ccatcttccagtacagtgttggatggtctaattgtgaagctcctaacactgtctggtaaa 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ccatcttccagcacagtgttggatggtctaattgtgaagctcctaacactgtctggtaaa 68
Query: 65 gatggccc 72
||||||||
Sbjct: 69 gatggccc 76
>RF00241;mir-8;AAHX01032846.1/18098-18178 10116:Rattus norvegicus
(Norway rat)
Length = 81
Score = 91.7 bits (46), Expect = 1e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 3 gtccatcttccagtacagtgttggatggtctaattgtgaagctcctaacactgtctggta 62
|||||||||||||| |||||||||||||| || | |||||||||||||||||||||||
Sbjct: 7 gtccatcttccagtgcagtgttggatggttgaagtacgaagctcctaacactgtctggta 66
Query: 63 aagatggccc 72
||||||||||
Sbjct: 67 aagatggccc 76
>RF00241;mir-8;AAFR03037717.1/783-855 13616:Monodelphis domestica
(gray short-tailed opossum)
Length = 73
Score = 54.0 bits (27), Expect = 2e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 38 gtgaagctcctaacactgtctggtaaagatg 68
|||||||| ||||||||||||||||||||||
Sbjct: 34 gtgaagcttctaacactgtctggtaaagatg 64
