miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01897;mir-188;ABRO01329850.1/1950-2056 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 107
Score = 135 bits (68), Expect = 7e-32
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1 tctcacatcccttgcatggtggagggtgagctttctgaaaacccctcccacatgcagggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 tctcacatcccttgcatggtggagggtgagctttctgaaaacccctcccacatgcagggt 80
Query: 61 ttgcagga 68
||||||||
Sbjct: 81 ttgcagga 88
>RF01897;mir-188;AABR04026186.1/13355-13249 10116:Rattus
norvegicus (Norway rat)
Length = 107
Score = 111 bits (56), Expect = 1e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 1 tctcacatcccttgcatggtggagggtgagctttctgaaaacccctcccacatgcagggt 60
|||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||
Sbjct: 21 tctcacatcccttgcatggtggagggcgagctctctgaaaactcctcccacatgcagggt 80
Query: 61 ttgcagga 68
||||||||
Sbjct: 81 ttgcagga 88
>RF01897;mir-188;ABRQ01388379.1/2439-2545 9813:Procavia capensis
(cape rock hyrax)
Length = 107
Score = 111 bits (56), Expect = 1e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 1 tctcacatcccttgcatggtggagggtgagctttctgaaaacccctcccacatgcagggt 60
||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||
Sbjct: 21 tctcacatcccttgcatggtggagggtgaactttatgaaaacccctcccacatgcaaggt 80
Query: 61 ttgcagga 68
||||||||
Sbjct: 81 ttgcagga 88
