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BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00241;mir-8;ABRQ01038382.1/145-67 9813:Procavia capensis (cape
          rock hyrax)
          Length = 79

 Score =  113 bits (57), Expect = 3e-25
 Identities = 60/61 (98%)
 Strand = Plus / Plus

                                                                      
Query: 4  tcttacccagcagtgtttgggtgctggttgggagtctctaatactgccgggtaatgatgg 63
          ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tcttacctagcagtgtttgggtgctggttgggagtctctaatactgccgggtaatgatgg 71

           
Query: 64 a 64
          |
Sbjct: 72 a 72

>RF00241;mir-8;AY865826.1/65-141 9593:Gorilla gorilla (Western
          Gorilla)
          Length = 77

 Score =  109 bits (55), Expect = 4e-24
 Identities = 62/63 (98%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                      
Query: 2  cgtcttacccagcagtgtttgggtgctggttgggagtctctaatactgccgggtaatgat 61
          |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 9  cgtcttacccagcagtgtttgggtgc-ggttgggagtctctaatactgccgggtaatgat 67

             
Query: 62 gga 64
          |||
Sbjct: 68 gga 70

>RF00241;mir-8;AAFR03037717.1/371-448 13616:Monodelphis domestica
          (gray short-tailed opossum)
          Length = 78

 Score = 97.6 bits (49), Expect = 1e-20
 Identities = 58/61 (95%)
 Strand = Plus / Plus

                                                                      
Query: 4  tcttacccagcagtgtttgggtgctggttgggagtctctaatactgccgggtaatgatgg 63
          |||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||
Sbjct: 11 tcttacccagcagtgtttgggtgccgctcgggagtctctaatactgccgggtaatgatgg 70

           
Query: 64 a 64
          |
Sbjct: 71 a 71

>RF00241;mir-8;AAGW01121226.1/669-596 9986:Oryctolagus cuniculus
          (rabbit)
          Length = 74

 Score = 46.1 bits (23), Expect = 5e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 37 gtctctaatactgccgggtaatgatgg 63
          ||||||||||||||| |||||||||||
Sbjct: 41 gtctctaatactgcctggtaatgatgg 67

>RF00241;mir-8;AAPY01315282.1/3050-2977 37347:Tupaia belangeri
          (northern tree shrew)
          Length = 74

 Score = 44.1 bits (22), Expect = 2e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 37 gtctctaatactgccgggtaatgatg 62
          ||||||||||||||| ||||||||||
Sbjct: 41 gtctctaatactgcctggtaatgatg 66

>RF00241;mir-8;AAYZ01293785.1/5589-5517 9978:Ochotona princeps
          (American pika)
          Length = 73

 Score = 42.1 bits (21), Expect = 8e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 38 tctctaatactgccgggtaatgatg 62
          |||||||||||||| ||||||||||
Sbjct: 41 tctctaatactgcctggtaatgatg 65

>RF00241;mir-8;CU855953.4/78255-78183 7955:Danio rerio (zebrafish)
          Length = 73

 Score = 42.1 bits (21), Expect = 8e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 38 tctctaatactgccgggtaatgatg 62
          |||||||||||||| ||||||||||
Sbjct: 41 tctctaatactgcctggtaatgatg 65

>RF00241;mir-8;BAAE01261092.1/748-823 8090:Oryzias latipes
          (Japanese medaka)
          Length = 76

 Score = 42.1 bits (21), Expect = 8e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 38 tctctaatactgccgggtaatgatg 62
          |||||||||||||| ||||||||||
Sbjct: 43 tctctaatactgcctggtaatgatg 67