miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;CR954190.2/110040-110176 3880:Medicago truncatula
(barrel medic)
Length = 137
Score = 81.8 bits (41), Expect = 2e-15
Identities = 107/129 (82%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagcaaaaaggggtcaacaaaagtgaatatatttggac 70
||||||||| |||||||||| |||||||||| ||||||||||||| ||| |||||||
Sbjct: 133 tactccctccgtcccaaaatgtaagcaaaaattggtcaacaaaagttaatgtatttggtt 74
Query: 71 taaattttaaaccaaattcatcaactttcgttgaccacattttgcttatattttgggaca 130
||| |||| ||| |||||||||||| ||| ||| ||||||||| ||||||||||
Sbjct: 73 caaaatttatgccacattcatcaacttatgttaacccatttttgcttacattttgggacg 14
Query: 131 gagagagta 139
||| |||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;CU302344.1/39855-39991 3880:Medicago truncatula
(barrel medic)
Length = 137
Score = 79.8 bits (40), Expect = 1e-14
Identities = 91/108 (84%)
Strand = Plus / Minus
Query: 22 tcccaaaatataagcaaaaaggggtcaacaaaagtgaatatatttggactaaattttaaa 81
||||||||| |||||||||| ||||||||| |||| | | ||| ||| ||||||||||
Sbjct: 122 tcccaaaatgtaagcaaaaatgggtcaacataagttagtgtatctggtacaaattttaaa 63
Query: 82 ccaaattcatcaactttcgttgaccacattttgcttatattttgggac 129
|||||| ||| |||||| ||||||| ||||||||| ||||||||||
Sbjct: 62 ccaaatacattaactttttttgaccaatttttgcttacattttgggac 15
>RF00906;MIR1122;AC161407.5/87285-87421 3880:Medicago truncatula
(barrel medic)
Length = 137
Score = 73.8 bits (37), Expect = 6e-13
Identities = 106/129 (82%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatataagcaaaaaggggtcaacaaaagtgaatatatttggac 70
||||||||| |||||||||||||||||||| ||||||||||||| ||| |||||||
Sbjct: 5 tactccctccttcccaaaatataagcaaaaattggtcaacaaaagttaatgtatttggtt 64
Query: 71 taaattttaaaccaaattcatcaactttcgttgaccacattttgcttatattttgggaca 130
||| ||| | || || ||||||||| |||||||| |||||||| ||||||||||
Sbjct: 65 caaaatttgtatcagatgcatcaacttatgttgaccaatctttgcttacattttgggacg 124
Query: 131 gagagagta 139
||| |||||
Sbjct: 125 gagggagta 133
Score = 67.9 bits (34), Expect = 4e-11
Identities = 97/118 (82%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagcaaaaaggggtcaacaaaagtgaatatatttggac 70
||||||||| |||||||||| |||||||| | |||||||| |||| || || ||
Sbjct: 133 tactccctccgtcccaaaatgtaagcaaagattggtcaacataagttgatgcatctgata 74
Query: 71 taaattttaaaccaaattcatcaactttcgttgaccacattttgcttatattttggga 128
||||||| |||||||| ||| |||||| |||||||| |||||||||||||||||||
Sbjct: 73 caaattttgaaccaaatacattaacttttgttgaccaatttttgcttatattttggga 16
>RF00906;MIR1122;AC165446.16/119089-118951 3880:Medicago truncatula
(barrel medic)
Length = 139
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 44 ggtcaacaaaagtgaatatatttggactaaattttaaaccaaattcatcaactttcgttg 103
||||||||||||||||| |||||||||| |||||| ||| |||| |||||| ||| ||||
Sbjct: 101 ggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaatttttgttg 42
Query: 104 acc 106
|||
Sbjct: 41 acc 39
>RF00906;MIR1122;AC157349.7/77890-78028 3880:Medicago truncatula
(barrel medic)
Length = 139
Score = 69.9 bits (35), Expect = 9e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 44 ggtcaacaaaagtgaatatatttggactaaattttaaaccaaattcatcaactttcgttg 103
||||||||||||||||| |||||||||| |||||| ||| | || |||||||||| ||||
Sbjct: 101 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttg 42
Query: 104 acc 106
|||
Sbjct: 41 acc 39
>RF00906;MIR1122;AC146972.54/71829-71691 3880:Medicago truncatula
(barrel medic)
Length = 139
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 44 ggtcaacaaaagtgaatatatttggactaaattttaaaccaaattcatcaactttcgttg 103
||||||||||||||||| ||||||||| |||||| ||| | || |||||||||| ||||
Sbjct: 39 ggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttg 98
Query: 104 acc 106
|||
Sbjct: 99 acc 101
>RF00906;MIR1122;AC191599.4/36848-36986 3880:Medicago truncatula
(barrel medic)
Length = 139
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 44 ggtcaacaaaagtgaatatatttggactaaattttaaaccaaattcatcaactttcgttg 103
||||||||||| ||||| |||||||||| |||||| ||| | || |||||||||| ||||
Sbjct: 39 ggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttg 98
Query: 104 a 104
|
Sbjct: 99 a 99
>RF00906;MIR1122;AAAA02014858.1/37527-37621 39946:Oryza sativa
Indica Group
Length = 95
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 9 agtactccctctgtcccaaaatataag 35
|||||||||||||||||||||||||||
Sbjct: 3 agtactccctctgtcccaaaatataag 29
>RF00906;MIR1122;AAAA02005900.1/34221-34065 39946:Oryza sativa
Indica Group
Length = 157
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 9 agtactccctctgtcccaaaatataag 35
|||||||||||||||||||||||||||
Sbjct: 3 agtactccctctgtcccaaaatataag 29
>RF00906;MIR1122;AACV01013579.1/19751-19640 39947:Oryza sativa
Japonica Group
Length = 112
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatataagca 37
|||||||||||||||||||||||||||
Sbjct: 5 tactccctctgtcccaaaatataagca 31
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 113 tgcttatattttgggacagagagagtaa 140
||||||||||||||||||||| ||||||
Sbjct: 31 tgcttatattttgggacagagggagtaa 4
>RF00906;MIR1122;AP008214.1/27846174-27846285 39947:Oryza sativa
Japonica Group
Length = 112
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatataagca 37
|||||||||||||||||||||||||||
Sbjct: 5 tactccctctgtcccaaaatataagca 31
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 113 tgcttatattttgggacagagagagta 139
||||||||||||||||||||| |||||
Sbjct: 31 tgcttatattttgggacagagggagta 5
>RF00906;MIR1122;AACV01002422.1/2768-2895 39947:Oryza sativa
Japonica Group
Length = 128
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 9 agtactccctctgtcccaaaatataag 35
|||||||||||||||||||||||||||
Sbjct: 3 agtactccctctgtcccaaaatataag 29
>RF00906;MIR1122;AL512546.2/55731-55825 4530:Oryza sativa (rice)
Length = 95
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 9 agtactccctctgtcccaaaatataag 35
|||||||||||||||||||||||||||
Sbjct: 3 agtactccctctgtcccaaaatataag 29
>RF00906;MIR1122;AP008207.1/24395058-24395107 39947:Oryza sativa
Japonica Group
Length = 50
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 7 taagtactccctctgtcccaaaatata 33
|||||||||||||||||||||||||||
Sbjct: 1 taagtactccctctgtcccaaaatata 27
>RF00906;MIR1122;AP004891.4/64233-64389 39947:Oryza sativa
Japonica Group
Length = 157
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 9 agtactccctctgtcccaaaatataag 35
|||||||||||||||||||||||||||
Sbjct: 3 agtactccctctgtcccaaaatataag 29
>RF00906;MIR1122;AC147498.15/3925-4071 3880:Medicago truncatula
(barrel medic)
Length = 147
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 109 attttgcttatattttgggacagagagagtaata 142
||||||||||||||||| ||||||| ||||||||
Sbjct: 113 attttgcttatattttgagacagagggagtaata 146
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagcaaaa 40
||||||||||||| ||||||||||||||||
Sbjct: 143 tactccctctgtctcaaaatataagcaaaa 114
>RF00906;MIR1122;AAAA02004006.1/11200-11089 39946:Oryza sativa
Indica Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 8 aagtactccctctgtcccaaaatataagca 37
|||||||||| |||||||||||||||||||
Sbjct: 2 aagtactccccctgtcccaaaatataagca 31
>RF00906;MIR1122;AAAA02027128.1/44166-44066 39946:Oryza sativa
Indica Group
Length = 101
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 10 gtactccctctgtcccaaaatataag 35
||||||||||||||||||||||||||
Sbjct: 98 gtactccctctgtcccaaaatataag 73
>RF00906;MIR1122;AP001073.1/31422-31289 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 10 gtactccctctgtcccaaaatataag 35
||||||||||||||||||||||||||
Sbjct: 4 gtactccctctgtcccaaaatataag 29
>RF00906;MIR1122;AP005313.3/33733-33833 39947:Oryza sativa
Japonica Group
Length = 101
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 10 gtactccctctgtcccaaaatataag 35
||||||||||||||||||||||||||
Sbjct: 98 gtactccctctgtcccaaaatataag 73
>RF00906;MIR1122;AAAA02011966.1/4807-4962 39946:Oryza sativa
Indica Group
Length = 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 10 gtactccctctgtcccaaaatataag 35
||||||||||||||||||||||||||
Sbjct: 4 gtactccctctgtcccaaaatataag 29
>RF00906;MIR1122;AL845344.4/40945-41080 4530:Oryza sativa (rice)
Length = 136
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatataag 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctctgtcccaaaatataag 29
>RF00906;MIR1122;AACV01015822.1/5399-5292 39947:Oryza sativa
Japonica Group
Length = 108
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatataag 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctctgtcccaaaatataag 29
>RF00906;MIR1122;AAAA02016947.1/4733-4836 39946:Oryza sativa
Indica Group
Length = 104
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 9 agtactccctctgtcccaaaatataagca 37
||||||||||| |||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaatataagca 31
>RF00906;MIR1122;AP004994.2/80471-80627 39947:Oryza sativa Japonica
Group
Length = 157
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 taagtactccctctgtcccaaaatataag 35
||||||||||||| |||||||||||||||
Sbjct: 157 taagtactccctccgtcccaaaatataag 129
>RF00906;MIR1122;AC120987.2/63054-63157 39947:Oryza sativa Japonica
Group
Length = 104
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 9 agtactccctctgtcccaaaatataagca 37
||||||||||| |||||||||||||||||
Sbjct: 102 agtactccctccgtcccaaaatataagca 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatataagca 37
|||| ||||||||||||||||||||||
Sbjct: 5 tactacctctgtcccaaaatataagca 31
>RF00906;MIR1122;AP008212.1/4114034-4113904 39947:Oryza sativa
Japonica Group
Length = 131
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 taagtactccctctgtcccaaaatataag 35
||||||||||||||||||| |||||||||
Sbjct: 131 taagtactccctctgtccctaaatataag 103
>RF00906;MIR1122;AC170084.14/53354-53198 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 9 agtactccctctgtcccaaaatataagcaaaa 40
|||||||||||||| ||||||||||||||||
Sbjct: 3 agtactccctctgtttcaaaatataagcaaaa 34
>RF00906;MIR1122;AAAA02027438.1/10618-10774 39946:Oryza sativa
Indica Group
Length = 157
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 aagtactccctctgtcccaaaatataag 35
||||||||||||| ||||||||||||||
Sbjct: 2 aagtactccctctatcccaaaatataag 29
>RF00906;MIR1122;AP004556.3/98434-98589 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataa 34
||||||||||||||||||||||||
Sbjct: 152 tactccctctgtcccaaaatataa 129
>RF00906;MIR1122;AP008212.1/3593579-3593709 39947:Oryza sativa
Japonica Group
Length = 131
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataa 34
||||||||||||||||||||||||
Sbjct: 127 tactccctctgtcccaaaatataa 104
>RF00906;MIR1122;AC020666.8/128854-128945 39947:Oryza sativa
Japonica Group
Length = 92
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 gtactccctctgtcccaaaatata 33
||||||||||||||||||||||||
Sbjct: 4 gtactccctctgtcccaaaatata 27
>RF00906;MIR1122;AP005586.3/39119-39252 39947:Oryza sativa Japonica
Group
Length = 134
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 10 gtactccctctgtcccaaaatataagca 37
|||||||||| |||||||||||||||||
Sbjct: 131 gtactccctccgtcccaaaatataagca 104
>RF00906;MIR1122;AL662959.3/95147-95258 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatataagcaa 38
||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatataagcaa 32
>RF00906;MIR1122;AP008210.1/24813715-24813809 39947:Oryza sativa
Japonica Group
Length = 95
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 10 gtactccctctgtcccaaaatataagca 37
|||||||||| |||||||||||||||||
Sbjct: 92 gtactccctccgtcccaaaatataagca 65
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 113 tgcttatattttgggacagagagagta 139
||||||||||||||||| |||||||||
Sbjct: 31 tgcttatattttgggacggagagagta 5
>RF00906;MIR1122;AP008207.1/29270032-29270129 39947:Oryza sativa
Japonica Group
Length = 98
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 116 ttatattttgggacagagagagta 139
||||||||||||||||||||||||
Sbjct: 28 ttatattttgggacagagagagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 8 aagtactccctctgtcccaaaatataa 34
|||||||| ||||||||||||||||||
Sbjct: 2 aagtactctctctgtcccaaaatataa 28
>RF00906;MIR1122;AC150978.15/4652-4771 3880:Medicago truncatula
(barrel medic)
Length = 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 109 attttgcttatattttgggacagagagagtaatat 143
||||||||||||||||| ||| ||| |||||||||
Sbjct: 86 attttgcttatattttgagacggagggagtaatat 120
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagcaaaa 40
||||||||| ||| ||||||||||||||||
Sbjct: 116 tactccctccgtctcaaaatataagcaaaa 87
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 agtactccctctgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 66 agtactccctctgtcccaaaata 44
>RF00906;MIR1122;AACV01004030.1/351-512 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatata 33
|||||||||||||||||||||||
Sbjct: 5 tactccctctgtcccaaaatata 27
>RF00906;MIR1122;AP008209.1/35984076-35984203 39947:Oryza sativa
Japonica Group
Length = 128
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 124 tactccctccgtcccaaaatataagca 98
>RF00906;MIR1122;AAAA02031697.1/13340-13228 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 117 tatattttgggacagagagagta 139
|||||||||||||||||||||||
Sbjct: 27 tatattttgggacagagagagta 5
>RF00906;MIR1122;AAAA02016488.1/7317-7428 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 108 tactccctccgtcccaaaatataagca 82
>RF00906;MIR1122;AAAA02018853.1/118-229 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 108 tactccctccgtcccaaaatataagca 82
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 agtactccctctgtcccaaaatataag 35
||||||||||| |||||||||||||||
Sbjct: 133 agtactccctccgtcccaaaatataag 107
>RF00906;MIR1122;AP002972.3/107404-107293 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatataagca 31
>RF00906;MIR1122;AAAA02003932.1/9414-9287 39946:Oryza sativa
Indica Group
Length = 128
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 agtactccctctgtcccaaaatataag 35
|||||||||| ||||||||||||||||
Sbjct: 3 agtactccctttgtcccaaaatataag 29
>RF00906;MIR1122;AAAA02033081.1/3802-3711 39946:Oryza sativa
Indica Group
Length = 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 8 aagtactccctctgtcccaaaatataa 34
|||||||||||| ||||||||||||||
Sbjct: 2 aagtactccctccgtcccaaaatataa 28
>RF00906;MIR1122;AC090873.4/89374-89493 4530:Oryza sativa (rice)
Length = 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 agtactccctctgtcccaaaatataag 35
||||||||||| |||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaatataag 29
>RF00906;MIR1122;AAAA02034725.1/24676-24788 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 agtactccctctgtcccaaaatataag 35
||||||||||| |||||||||||||||
Sbjct: 111 agtactccctccgtcccaaaatataag 85
>RF00906;MIR1122;AAAA02007751.1/21104-20995 39946:Oryza sativa
Indica Group
Length = 110
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 113 tgcttatattttgggacagagagagta 139
||||||||||||||||| |||||||||
Sbjct: 31 tgcttatattttgggacggagagagta 5
>RF00906;MIR1122;AP008209.1/8919908-8919797 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 108 tactccctccgtcccaaaatataagca 82
>RF00906;MIR1122;AP008208.1/1166338-1166449 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 108 tactccctccgtcccaaaatataagca 82
>RF00906;MIR1122;AACV01014374.1/13115-13004 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 108 tactccctccgtcccaaaatataagca 82
>RF00906;MIR1122;AP004621.3/94317-94428 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatataagca 37
|||||||||||||||||||| ||||||
Sbjct: 5 tactccctctgtcccaaaatgtaagca 31
>RF00906;MIR1122;AC130724.2/11285-11174 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatataagca 31
>RF00906;MIR1122;AAAA02026539.1/31268-31114 39946:Oryza sativa
Indica Group
Length = 155
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatata 33
|||||||||||||||||||||||
Sbjct: 151 tactccctctgtcccaaaatata 129
>RF00906;MIR1122;AP003410.4/123214-123103 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 108 tactccctccgtcccaaaatataagca 82
>RF00906;MIR1122;AP008207.1/42089526-42089634 39947:Oryza sativa
Japonica Group
Length = 109
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatataagca 31
>RF00906;MIR1122;AP003760.4/5605-5476 39947:Oryza sativa Japonica
Group
Length = 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 126 tactccctccgtcccaaaatataagca 100
>RF00906;MIR1122;AAAA02006623.1/10234-10353 39946:Oryza sativa
Indica Group
Length = 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 agtactccctctgtcccaaaatataag 35
||||||||||| |||||||||||||||
Sbjct: 118 agtactccctccgtcccaaaatataag 92
>RF00906;MIR1122;AAAA02006274.1/23456-23551 39946:Oryza sativa
Indica Group
Length = 96
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 92 tactccctccgtcccaaaatataagca 66
>RF00906;MIR1122;AP008209.1/35587272-35587192 39947:Oryza sativa
Japonica Group
Length = 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||||||| |||||||||||||
Sbjct: 77 tactccctctgtctcaaaatataagca 51
>RF00906;MIR1122;AAAA02034673.1/6609-6720 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 gtactccctctgtcccaaaatataagc 36
|||||||||| ||||||||||||||||
Sbjct: 109 gtactccctccgtcccaaaatataagc 83
>RF00906;MIR1122;CT832702.1/1285-1384 39946:Oryza sativa Indica
Group
Length = 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 taagtactccctctgtcccaaaatata 33
||||||||||||| |||||||||||||
Sbjct: 100 taagtactccctccgtcccaaaatata 74
>RF00906;MIR1122;AP008207.1/22739295-22739406 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 108 tactccctccgtcccaaaatataagca 82
>RF00906;MIR1122;AAAA02028032.1/2328-2217 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 108 tactccctccgtcccaaaatataagca 82
>RF00906;MIR1122;AC079357.3/127350-127255 39947:Oryza sativa
Japonica Group
Length = 96
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 92 tactccctccgtcccaaaatataagca 66
>RF00906;MIR1122;AP005421.3/127890-127779 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatataagca 31
>RF00906;MIR1122;AAAA02015207.1/7418-7517 39946:Oryza sativa
Indica Group
Length = 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 taagtactccctctgtcccaaaatata 33
||||||||||||| |||||||||||||
Sbjct: 1 taagtactccctccgtcccaaaatata 27
>RF00906;MIR1122;AC138197.3/31250-31161 39947:Oryza sativa
Japonica Group
Length = 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 86 tactccctccgtcccaaaatataagca 60
>RF00906;MIR1122;AACV01025228.1/13353-13452 39947:Oryza sativa
Japonica Group
Length = 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatataagca 31
>RF00906;MIR1122;AAAA02004209.1/3478-3367 39946:Oryza sativa
Indica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatataagca 31
>RF00906;MIR1122;AAAA02018654.1/14883-14772 39946:Oryza sativa
Indica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 agtactccctctgtcccaaaatataag 35
||||||||||| |||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaatataag 29
>RF00906;MIR1122;AL731597.3/103356-103467 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 108 tactccctccgtcccaaaatataagca 82
>RF00906;MIR1122;AP008215.1/21144119-21144034 39947:Oryza sativa
Japonica Group
Length = 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatataagca 37
||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatataagca 31
>RF01058;MIR806;AACV01008707.1/8338-8098 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatat 32
||||||||||||||||||||||
Sbjct: 2 tactccctctgtcccaaaatat 23
>RF01058;MIR806;AC136971.3/14967-14725 39947:Oryza sativa Japonica
Group
Length = 243
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatat 32
||||||||||||||||||||||
Sbjct: 242 tactccctctgtcccaaaatat 221
>RF00906;MIR1122;CR962128.2/73361-73205 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 8 aagtactccctctgtcccaaaatataagcaaaaa 41
|||||||||||| || |||||||||||||||||
Sbjct: 156 aagtactccctccgtttcaaaatataagcaaaaa 123
>RF00906;MIR1122;AC151528.37/26859-27015 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 8 aagtactccctctgtcccaaaatataagcaaaaa 41
|||||||||||| || |||||||||||||||||
Sbjct: 2 aagtactccctccgtttcaaaatataagcaaaaa 35
>RF00906;MIR1122;AC148487.14/40672-40806 3880:Medicago truncatula
(barrel medic)
Length = 135
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 10 gtactccctctgtcccaaaatataagcaaa 39
|||||||||| ||| |||||||||||||||
Sbjct: 4 gtactccctccgtctcaaaatataagcaaa 33
>RF00906;MIR1122;AAAA02002553.1/2264-2375 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 8 aagtactccctctgtcccaaaatata 33
|||||||||||| |||||||||||||
Sbjct: 111 aagtactccctccgtcccaaaatata 86
>RF00906;MIR1122;AAAA02021832.1/90208-90105 39946:Oryza sativa
Indica Group
Length = 104
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 8 aagtactccctctgtcccaaaatataagca 37
|||||||||||| |||| ||||||||||||
Sbjct: 103 aagtactccctccgtcctaaaatataagca 74
>RF00906;MIR1122;AP003725.3/107083-106927 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 gtactccctctgtcccaaaatataag 35
|||||||||| |||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaatataag 29
>RF00906;MIR1122;AAAA02010779.1/26630-26778 39946:Oryza sativa
Indica Group
Length = 149
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 8 aagtactccctctgtcccaaaa 29
||||||||||||||||||||||
Sbjct: 148 aagtactccctctgtcccaaaa 127
>RF00906;MIR1122;AACV01021306.1/37655-37776 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 gtactccctctgtcccaaaatataag 35
|||||||||| |||||||||||||||
Sbjct: 119 gtactccctccgtcccaaaatataag 94
>RF00906;MIR1122;AP008218.1/11741623-11741744 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 gtactccctctgtcccaaaatataag 35
|||||||||| |||||||||||||||
Sbjct: 119 gtactccctccgtcccaaaatataag 94
>RF00906;MIR1122;AAAA02032049.1/7937-7781 39946:Oryza sativa Indica
Group
Length = 157
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 gtactccctctgtcccaaaatataag 35
|||||||||||||||| |||||||||
Sbjct: 154 gtactccctctgtccctaaatataag 129
>RF00906;MIR1122;DJ053679.1/1921-2077 4530:Oryza sativa (rice)
Length = 157
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 gtactccctctgtcccaaaatataag 35
||||||||||||||| ||||||||||
Sbjct: 4 gtactccctctgtcctaaaatataag 29
>RF00906;MIR1122;AACV01001940.1/8575-8731 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 gtactccctctgtcccaaaatataag 35
||||||||||||||||| ||||||||
Sbjct: 4 gtactccctctgtcccacaatataag 29
>RF00906;MIR1122;AP008218.1/5877959-5877822 39947:Oryza sativa
Japonica Group
Length = 138
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 gtactccctctgtcccaaaatataag 35
||||||||||||||||| ||||||||
Sbjct: 4 gtactccctctgtcccataatataag 29
>RF00906;MIR1122;AACV01022450.1/23564-23424 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaatataagc 36
|||||||||||||||| |||||||||
Sbjct: 5 tactccctctgtcccataatataagc 30
>RF00906;MIR1122;AACV01022590.1/16657-16788 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 gtactccctctgtcccaaaatataag 35
||||||||||||||||| ||||||||
Sbjct: 4 gtactccctctgtcccataatataag 29
>RF00906;MIR1122;AP008208.1/6008947-6008837 39947:Oryza sativa
Japonica Group
Length = 111
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 8 aagtactccctctgtcccaaaatataagca 37
|||||||||||| ||||||||||||||||
Sbjct: 2 aagtactccctccatcccaaaatataagca 31
>RF00906;MIR1122;AP008209.1/27314174-27314047 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 gtactccctctgtcccaaaatataag 35
|||||||||| |||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaatataag 29
>RF00906;MIR1122;AAAA02015438.1/12525-12421 39946:Oryza sativa
Indica Group
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaatataagc 36
||||||||| ||||||||||||||||
Sbjct: 101 tactccctcagtcccaaaatataagc 76
>RF00906;MIR1122;AACV01003040.1/15315-15426 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 gtactccctctgtcccaaaatataag 35
|||||||||| |||||||||||||||
Sbjct: 109 gtactccctccgtcccaaaatataag 84
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 gtactccctctgtcccaaaatataag 35
|||||||||| |||||||||||||||
Sbjct: 137 gtactccctccgtcccaaaatataag 112
