miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00639;mir-515;AANU01181659.1/5786-5873 9544:Macaca mulatta
(rhesus monkey)
Length = 88
Score = 117 bits (59), Expect = 2e-26
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 1 ctcaggctgtgactctccagagggatgcactttcttttatgtgnnnnnnnnngaaggcgc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2 ctcaggctgtgactctccagagggatgcactttcttttatgtgaaaaaaaaagaaggcgc 61
Query: 61 atccctttggagcgttacggtttggg 86
||||||||||||||||||||||||||
Sbjct: 62 atccctttggagcgttacggtttggg 87
>RF00639;mir-515;EU086470.1/69947-70033 61621:Rhinopithecus bieti
(Black snub-nosed monkey)
Length = 87
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 ctcaggctgtgactctccagagggatgcactttct 35
||||||||||||||||| ||||||| |||||||||
Sbjct: 2 ctcaggctgtgactctctagagggaagcactttct 36
>RF00639;mir-515;AANU01181659.1/12136-12222 9544:Macaca mulatta
(rhesus monkey)
Length = 87
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 2 tcaggctgtgactctccagagggatgcactttct 35
|||||||||||| ||||||||||| |||||||||
Sbjct: 3 tcaggctgtgaccctccagagggaagcactttct 36
>RF00639;mir-515;CABD01442931.2/227-141 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 87
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 57 gcgcatccctttggagcgttacggtttg 84
|||| |||||||||||||||||||||||
Sbjct: 57 gcgcttccctttggagcgttacggtttg 84
>RF00639;mir-515;EU086471.1/93107-93193 9590:Symphalangus
syndactylus (siamang)
Length = 87
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 ctcaggctgtgactctccagagggatgcactttct 35
|||| |||||||||||||| ||||| |||||||||
Sbjct: 2 ctcacgctgtgactctccaaagggaagcactttct 36
>RF00639;mir-515;AANU01181659.1/6633-6719 9544:Macaca mulatta
(rhesus monkey)
Length = 87
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 ctcaggctgtgactctccagagggatgcactttct 35
||||||||||||| ||| ||||||| |||||||||
Sbjct: 2 ctcaggctgtgaccctctagagggaagcactttct 36
