miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00755;mir-542;ABRQ01123746.1/1402-1318 9813:Procavia capensis
          (cape rock hyrax)
          Length = 85

 Score =  153 bits (77), Expect = 5e-37
 Identities = 83/85 (97%)
 Strand = Plus / Plus

                                                                      
Query: 2  agacctcagacatctcggggatcatcatgtcacgagataccactgtgcacttgtgacaga 61
          ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  agacctcagacatttcggggatcatcatgtcacgagataccactgtgcacttgtgacaga 60

                                   
Query: 62 ttgataactgaaaggtctgggagcc 86
          ||||||||||||| |||||||||||
Sbjct: 61 ttgataactgaaatgtctgggagcc 85




>RF00755;mir-542;AAIY01425199.1/1318-1400 9371:Echinops telfairi
          (small Madagascar hedgehog)
          Length = 83

 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                   
Query: 37 gataccactgtgcacttgtgacagattgataactgaaaggt 77
          ||||||||||   ||||||||||||||||||||||||||||
Sbjct: 34 gataccactgcatacttgtgacagattgataactgaaaggt 74