miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01061;mir-548;AANU01296214.1/2804-2721 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 81.8 bits (41), Expect = 1e-15
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
||||||| ||||||||||||||||| |||||| | ||||||||||| || ||||||| |
Sbjct: 84 tattaggctgatgcaaaagtaattgcagttttt-gccattaaaagtaatgtcaaaacccg 26
Query: 68 caattacttctgcaccaaactaata 92
||||||||| |||||||| ||||||
Sbjct: 25 caattacttttgcaccaacctaata 1
>RF01061;mir-548;AANU01261834.1/7167-7084 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 73.8 bits (37), Expect = 4e-13
Identities = 74/85 (87%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||||||| |||||||||||||| ||||| | ||| |||||||||||| ||||| | |
Sbjct: 1 tattaggttggtgcaaaagtaattgtggtttgt-gtctttaaaagtagtggcaaaaaccg 59
Query: 68 caattacttctgcaccaaactaata 92
||| ||||| |||||||| ||||||
Sbjct: 60 caactacttttgcaccaacctaata 84
>RF01061;mir-548;ABBV01001495.1/1250-1333 447454:candidate
division TM7 single-cell isolate TM7a
Length = 84
Score = 71.9 bits (36), Expect = 1e-12
Identities = 73/84 (86%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 attaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccggc 68
||||||||| |||| ||||||||| |||||| | ||||||||||| || ||||||| ||
Sbjct: 2 attaggttggtgcataagtaattgcagttttt-gccattaaaagtaatggcaaaacccgc 60
Query: 69 aattacttctgcaccaaactaata 92
|||||||| |||||||| ||||||
Sbjct: 61 aattacttgtgcaccaacctaata 84
>RF01061;mir-548;AANU01285209.1/57947-57864 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 69.9 bits (35), Expect = 6e-12
Identities = 72/83 (86%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||||||| ||||||||| || | ||||||| | ||||||||||| |||||||| | |
Sbjct: 1 tattaggttggtgcaaaagttatcgtggttttt-gccattaaaagtaatgacaaaaaccg 59
Query: 68 caattacttctgcaccaaactaa 90
||||||||| |||||||| ||||
Sbjct: 60 caattacttttgcaccaacctaa 82
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 10 ttaggttgatgcaaaagtaattggggttttt 40
|||||||| |||||||||||||| |||||||
Sbjct: 82 ttaggttggtgcaaaagtaattgcggttttt 52
>RF01061;mir-548;AADD01036043.1/27192-27275 9606:Homo sapiens
(human)
Length = 84
Score = 65.9 bits (33), Expect = 9e-11
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
||||||||| |||||||||||||| ||||| | ||||||||||||||| | ||| | |
Sbjct: 1 tattaggttagtgcaaaagtaattgcagttttgt-tcattaaaagtagtggccaaaaccg 59
Query: 68 caattacttctgcaccaaactaata 92
||||||||| |||||||| ||||||
Sbjct: 60 caattacttttgcaccaacctaata 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 8 tattaggttgatgcaaaagtaattggggtttt 39
|||||||||| |||||||||||||| ||||||
Sbjct: 84 tattaggttggtgcaaaagtaattgcggtttt 53
>RF01061;mir-548;AANU01236941.1/3584-3501 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 65.9 bits (33), Expect = 9e-11
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||||||| ||||||| |||||| |||| | |||||| ||||||||||||||| | |
Sbjct: 1 tattaggttggtgcaaaattaattgcagtttat-gtcattgaaagtagtgacaaaaaccg 59
Query: 68 caattacttctgcaccaaactaata 92
||||| ||| |||||||| ||||||
Sbjct: 60 caattgcttttgcaccaacctaata 84
>RF01061;mir-548;AC074323.4/95680-95597 9606:Homo sapiens (human)
Length = 84
Score = 61.9 bits (31), Expect = 1e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 19 tgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccggcaattacttct 78
|||||||||||||| ||||||| | ||||||||||| || ||||| | |||||||||| |
Sbjct: 12 tgcaaaagtaattgcggttttt-gccattaaaagtaatggcaaaaaccgcaattactttt 70
Query: 79 gcaccaa 85
|||||||
Sbjct: 71 gcaccaa 77
>RF01061;mir-548;AC111199.4/17434-17350 9606:Homo sapiens (human)
Length = 85
Score = 60.0 bits (30), Expect = 5e-09
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
||||||||||||||||||||||||| ||||||| |||| ||||||| | ||||| | |
Sbjct: 1 tattaggttgatgcaaaagtaattgtggtttttgcccatt-aaagtaggggcaaaaaccg 59
Query: 68 caattacttctgca 81
||||||||| ||||
Sbjct: 60 caattacttttgca 73
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 11 taggttgatgcaaaagtaattggggttttt 40
|||||||||||||||||||||| |||||||
Sbjct: 81 taggttgatgcaaaagtaattgcggttttt 52
>RF01061;mir-548;AADB02010442.1/1775967-1775884 9606:Homo sapiens
(human)
Length = 84
Score = 60.0 bits (30), Expect = 5e-09
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 11 taggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccggcaa 70
||||||| |||||||||||||| || |||||| |||| |||| | |||||||| | ||||
Sbjct: 4 taggttgttgcaaaagtaattgcgg-tttttgccattcaaagcaatgacaaaaaccgcaa 62
Query: 71 ttacttctgcaccaaactaata 92
|||||| |||| ||| ||||||
Sbjct: 63 ttacttttgcaacaacctaata 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 8 tattaggttgatgcaaaagtaattggggttttt 40
|||||||||| |||||||||||||| |||||||
Sbjct: 84 tattaggttgttgcaaaagtaattgcggttttt 52
>RF01061;mir-548;AC202678.6/146907-146824 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 60.0 bits (30), Expect = 5e-09
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 12 aggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccggcaat 71
|||||| |||||||||||||| || ||||||||||| |||||| || |||| | |||||
Sbjct: 5 aggttggtgcaaaagtaattgcgg-tttttgtcattgaaagtaatggcaaagaccgcaat 63
Query: 72 tacttctgcaccaa 85
||||| ||||||||
Sbjct: 64 tacttttgcaccaa 77
>RF01061;mir-548;AADB02011926.1/1109567-1109484 9606:Homo sapiens
(human)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 72/85 (84%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||||||| ||||||||||||| | ||||||||||| ||| ||| || ||||| | |
Sbjct: 1 tattaggttggtgcaaaagtaatt-gcgttttttgtcaataacagtcatggcaaaaaccg 59
Query: 68 caattacttctgcaccaaactaata 92
|| |||||| |||||||| ||||||
Sbjct: 60 cagttacttttgcaccaacctaata 84
>RF01061;mir-548;AADB02060964.1/614-531 9606:Homo sapiens (human)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 72/85 (84%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||| ||| |||||||||||||| |||||| | || | ||||||||| ||||| | |
Sbjct: 1 tattagtttggtgcaaaagtaattgcagttttt-gccactgaaagtagtggcaaaaactg 59
Query: 68 caattacttctgcaccaaactaata 92
|||||| || |||||||||||||||
Sbjct: 60 caattatttttgcaccaaactaata 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 54 agtgacaaaaccggcaattacttctgcaccaaactaata 92
|||| ||||| | |||||||||| |||||||||||||||
Sbjct: 39 agtggcaaaaactgcaattacttttgcaccaaactaata 1
>RF01061;mir-548;AADC01066816.1/395993-395910 9606:Homo sapiens
(human)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 72/85 (84%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||||||| ||| |||||||||| |||||| | |||| |||||| || ||||| | |
Sbjct: 1 tattaggttggtgctaaagtaattgcggttttg-gccattgaaagtaatgtcaaaaaccg 59
Query: 68 caattacttctgcaccaaactaata 92
|||||||||| ||||||| ||||||
Sbjct: 60 caattacttcagcaccaacctaata 84
>RF01061;mir-548;CABD01022860.2/18560-18643 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 72/85 (84%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||||||| |||||||||||||| || ||||||||||| | ||| || ||||| | |
Sbjct: 1 tattaggttgctgcaaaagtaattgtgg-tttttgtcattgattgtaatggcaaaaactg 59
Query: 68 caattacttctgcaccaaactaata 92
||||| ||| |||||||| ||||||
Sbjct: 60 caattgcttttgcaccaacctaata 84
>RF01061;mir-548;AANU01112255.1/642-725 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 72/85 (84%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||||| | |||||||||||||| || |||||| ||||||||||| || ||||| | |
Sbjct: 1 tattaggtgggtgcaaaagtaattgtgg-tttttgacattaaaagtaatggcaaaagccg 59
Query: 68 caattacttctgcaccaaactaata 92
|||| |||| |||||| | ||||||
Sbjct: 60 caataacttttgcaccgacctaata 84
>RF01061;mir-548;AADC01102129.1/13137-13054 9606:Homo sapiens
(human)
Length = 84
Score = 56.0 bits (28), Expect = 8e-08
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 10 ttaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccggca 69
|||||||| || ||||||||||| || |||||||||| |||||| || ||||| | |||
Sbjct: 3 ttaggttggtgaaaaagtaattgtgg-cttttgtcattgaaagtaatggcaaaaaccgca 61
Query: 70 attacttctgcaccaa 85
||||||| ||||||||
Sbjct: 62 attacttttgcaccaa 77
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 11 taggttgatgcaaaagtaattggggttttt 40
||||||| |||||||||||||| |||||||
Sbjct: 81 taggttggtgcaaaagtaattgcggttttt 52
>RF01061;mir-548;CABD01089019.1/6160-6243 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 56.0 bits (28), Expect = 8e-08
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 37 tttttgtcattaaaagtagtgacaaaaccggcaattacttctgcaccaaactaata 92
|||||| || ||||||||||| ||||| | |||||||||| |||||||| ||||||
Sbjct: 56 tttttggcactaaaagtagtggcaaaaaccgcaattacttttgcaccaacctaata 1
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttt 40
|||||||||| |||||||||||||| |||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgcggttttt 33
>RF01061;mir-548;ABGA01209240.1/4651-4734 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 11 taggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccggcaa 70
||||||| ||||||||| |||| ||||||| ||||||||||| || ||||| | ||||
Sbjct: 4 taggttggtgcaaaagttattgca-ttttttgccattaaaagtaatgccaaaaactgcaa 62
Query: 71 ttacttctgcaccaa 85
|||||| ||||||||
Sbjct: 63 ttacttttgcaccaa 77
>RF01061;mir-548;AACZ02123200.1/20871-20786 9598:Pan troglodytes
(chimpanzee)
Length = 86
Score = 54.0 bits (27), Expect = 3e-07
Identities = 72/86 (83%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattg-gggttttttgtcattaaaagtagtgacaaaaccg 66
|||||||||| ||||||||||||| | ||||||| |||||| |||| || | || ||
Sbjct: 1 tattaggttggngcaaaagtaattgctgtttttttgccattaacagtaatggcgaagacg 60
Query: 67 gcaattacttctgcaccaaactaata 92
|||||||||| |||||||| ||||||
Sbjct: 61 gcaattacttttgcaccaacctaata 86
>RF01061;mir-548;AANU01170885.1/1-85 9544:Macaca mulatta (rhesus
monkey)
Length = 85
Score = 54.0 bits (27), Expect = 3e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagta 54
|||||||||| |||||||||||||| || |||||| |||||||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgcgg-tttttgccattaaaagta 46
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 8 tattaggttgatgcaaaagtaattggggttttttg 42
||||||||||||||||||||||||| ||||||||
Sbjct: 85 tattaggttgatgcaaaagtaattgcagttttttg 51
>RF01061;mir-548;CABD01001244.1/12488-12571 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||||||| |||||||||||||| || ||||| ||||||||||| || ||||| | |
Sbjct: 1 tattaggttggtgcaaaagtaattgcgg-attttgccattaaaagtaatggcaaaaacag 59
Query: 68 caatta 73
||||||
Sbjct: 60 caatta 65
>RF01061;mir-548;AANU01230369.1/6404-6321 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||||||| |||||||| || |||||| ||| | ||||||||||| ||||||| |
Sbjct: 84 tattaggttggtgcaaaaggaactggggtcttt-gccattaaaagtaatgacaaagacca 26
Query: 68 caattacttctgcaccaa 85
||||||||| ||||||||
Sbjct: 25 caattacttttgcaccaa 8
>RF01061;mir-548;AANU01113788.1/5460-5543 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagt 53
||||||||||||||||||| ||||| || |||||| ||||||||||
Sbjct: 1 tattaggttgatgcaaaagcaattgtgg-tttttgccattaaaagt 45
>RF01061;mir-548;ABGA01354861.1/8138-8055 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttt 40
|||||||||| |||||||||||||| |||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgtggttttt 33
>RF01061;mir-548;AACZ02147953.1/7033-7116 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttt 40
|||||||||| |||||||||||||| |||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgtggttttt 33
>RF01061;mir-548;AACZ02013314.1/14210-14127 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttt 40
|||||||||||||||||||| |||| |||||||
Sbjct: 1 tattaggttgatgcaaaagttattgcggttttt 33
>RF01061;mir-548;AACZ02012902.1/7610-7693 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 71/85 (83%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||||||| ||| ||||| |||| ||||||| | ||||||||||| || ||||| | |
Sbjct: 1 tattaggttgctgctaaagtgattgcggttttt-gccattaaaagtaatggcaaaagccg 59
Query: 68 caattacttctgcaccaaactaata 92
|||| |||| || ||||| ||||||
Sbjct: 60 caatcacttttgtaccaacctaata 84
>RF01061;mir-548;AADD01165731.1/6332-6415 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 71/85 (83%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
||||||||| ||||||||||||||| || ||||| ||||||||| | || || || |
Sbjct: 84 tattaggttaatgcaaaagtaattgtgg-cttttgccattaaaagcaatggcagaaacca 26
Query: 68 caattacttctgcaccaaactaata 92
||||||||| |||||||| ||||||
Sbjct: 25 caattacttttgcaccaacctaata 1
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttt 38
|||||||||| |||||||||||||| |||||
Sbjct: 1 tattaggttggtgcaaaagtaattgtggttt 31
>RF01061;mir-548;ABSL01062835.1/19063-18980 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttt 40
|||||||||| |||||||||||||| |||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgtggttttt 33
Score = 48.1 bits (24), Expect = 2e-05
Identities = 70/84 (83%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 9 attaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccggc 68
||||||| | |||||||||||||| | ||| | | ||||||||||| || ||||| | |
Sbjct: 83 attaggtcggtgcaaaagtaattgagatttct-gccattaaaagtaatggcaaaaaccac 25
Query: 69 aattacttctgcaccaaactaata 92
|||||||| |||||||| ||||||
Sbjct: 24 aattacttttgcaccaacctaata 1
>RF01061;mir-548;AC117444.6/85961-86044 9606:Homo sapiens (human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 8 tattaggttgatgcaaaagtaattggggttttt 40
|||||||||| |||||||||||||| |||||||
Sbjct: 84 tattaggttggtgcaaaagtaattgcggttttt 52
>RF01061;mir-548;ABSL01029623.1/494-577 9606:Homo sapiens (human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttt 40
|||||||||| |||||||||||||| |||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgcggttttt 33
>RF01061;mir-548;CABD01524054.2/315-398 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttt 40
|||||||||| |||||||||||||| |||||||
Sbjct: 1 tattaggttgttgcaaaagtaattgcggttttt 33
>RF01061;mir-548;CABD01343912.1/1154-1071 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttt 40
|||||||||| |||||||||||||| |||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgcggttttt 33
>RF01061;mir-548;AC198186.3/82008-82091 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 8 tattaggttgatgcaaaagtaattggggttttt 40
|||||||||||| |||||||||||| |||||||
Sbjct: 84 tattaggttgatacaaaagtaattgcggttttt 52
>RF01061;mir-548;AANU01015630.1/1898-1815 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 71/85 (83%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||||||| || ||||||||||| | |||||| |||||||||| ||| || | | |
Sbjct: 1 tattaggttgttgtaaaagtaattgctg-tttttgccattaaaagtggtggcagtaacag 59
Query: 68 caattacttctgcaccaaactaata 92
||||||||| |||||||| ||||||
Sbjct: 60 caattacttttgcaccaacctaata 84
>RF01061;mir-548;AANU01124258.1/9508-9425 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 71/85 (83%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||||||| |||||||||||||| || || ||| | |||||||| || ||||| |
Sbjct: 1 tattaggttggtgcaaaagtaattgtgg-ttcttgcctataaaagtaatggcaaaaacca 59
Query: 68 caattacttctgcaccaaactaata 92
||||| ||| |||||||||||||||
Sbjct: 60 caatttcttttgcaccaaactaata 84
>RF01061;mir-548;AANU01248525.1/14264-14347 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 71/85 (83%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||||||| ||||||||||||| || |||||| ||| ||||| | || ||||| | |
Sbjct: 1 tattaggttggtgcaaaagtaattatgg-tttttgccatcaaaagcaatggcaaaaaccg 59
Query: 68 caattacttctgcaccaaactaata 92
||||||||| || ||||| ||||||
Sbjct: 60 caattacttttgtaccaatctaata 84
>RF01061;mir-548;AANU01283759.1/9595-9678 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||||||| | |||||| | ||| |||||| |||||||||||||| || ||||| | |
Sbjct: 1 tattaggttggtacaaaagcatttgtggtttt-tgtcattaaaagtaatggcaaaaactg 59
Query: 68 caattactt 76
|||||||||
Sbjct: 60 caattactt 68
>RF01061;mir-548;AACZ02112099.1/25061-25144 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggtttt 39
|||||||||| |||||||||||||| ||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgtggtttt 32
>RF01061;mir-548;ABBA01068880.1/357-274 9606:Homo sapiens (human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 9 attaggttgatgcaaaagtaattggggttttt 40
||||||||| |||||||||||||| |||||||
Sbjct: 2 attaggttggtgcaaaagtaattgcggttttt 33
>RF01061;mir-548;CABD01195132.2/4219-4302 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 70/84 (83%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||||||| ||||||||||| || || ||||| |||| |||||| | ||||||| |
Sbjct: 1 tattaggttgctgcaaaagtaactgtgg-gttttgccattgaaagtaatagcaaaacctg 59
Query: 68 caattacttctgcaccaaactaat 91
||||||||| |||| ||| |||||
Sbjct: 60 caattacttttgcagcaacctaat 83
>RF01061;mir-548;CABD01688067.1/1028-1113 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 86
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 8 tattaggttgatgcaaaagtaattggggtttt 39
|||||||||| |||||||||||||| ||||||
Sbjct: 86 tattaggttggtgcaaaagtaattgcggtttt 55
>RF01061;mir-548;CABD01009254.1/6580-6663 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggtttt 39
|||||||||| |||||||||||||| ||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgtggtttt 32
>RF01061;mir-548;CABD01149968.2/8500-8417 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 65/78 (83%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccgg 67
|||||||||| | |||||||||||| | | ||||||||||||| || || ||||| | |
Sbjct: 1 tattaggttggtrcaaaagtaattgctg-tgtttgtcattaaaaataatgccaaaaaccg 59
Query: 68 caattacttctgcaccaa 85
|| |||||| ||||||||
Sbjct: 60 cagttacttttgcaccaa 77
>RF01061;mir-548;AANU01290519.1/8633-8716 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggtttt 39
|||||||||| |||||||||||||| ||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgtggtttt 32
>RF01061;mir-548;AANU01274414.1/2282-2365 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaa 63
|||||||||| ||||||||||||| | |||| |||||||||||||| || |||||
Sbjct: 1 tattaggttggcgcaaaagtaattgcgatttt-tgtcattaaaagtaatggcaaaa 55
>RF01061;mir-548;AC191392.1/146896-146813 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 38 ttttgtcattaaaagtagtgacaaaaccggcaattacttctgcaccaaactaata 92
||||| ||||||||||| |||||| ||| ||||||||| ||||||| ||||||
Sbjct: 30 ttttgccattaaaagtaatgacaagacccacaattactttggcaccaacctaata 84
>RF01061;mir-548;AADC01117423.1/979850-979767 9606:Homo sapiens
(human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagta 54
|||| ||||| |||||||||||||| || |||||| |||||||||||
Sbjct: 1 tattcggttggtgcaaaagtaattgcgg-tttttgccattaaaagta 46
>RF01061;mir-548;AC003681.1/24588-24671 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 69/83 (83%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 10 ttaggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccggca 69
|||| ||| |||||||||||||| || |||||| |||||||| | || ||||| | | |
Sbjct: 3 ttagattggtgcaaaagtaattgtgg-tttttgccattaaaaatgatggcaaaaactgta 61
Query: 70 attacttctgcaccaaactaata 92
||||||| |||||||| ||||||
Sbjct: 62 attacttttgcaccaatctaata 84
>RF01061;mir-548;AC026223.11/118111-118027 9606:Homo sapiens
(human)
Length = 85
Score = 46.1 bits (23), Expect = 8e-05
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaaaagta 54
||||||||||||||||| ||||||| || | | ||||||||||||||
Sbjct: 1 tattaggttgatgcaaacgtaattgcgg-tgtctgtcattaaaagta 46
>RF01061;mir-548;AC121493.1/11246-11329 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 8 tattaggttgatgcaaaagtaattggggttt 38
|||||||||| |||||||||||||| |||||
Sbjct: 84 tattaggttggtgcaaaagtaattgtggttt 54
>RF01061;mir-548;AANU01255888.1/15264-15181 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 19 tgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccggcaattacttct 78
|||||||||||||| || |||||| ||||||||||| || ||||| | || |||||| |
Sbjct: 12 tgcaaaagtaattgtgg-tttttgccattaaaagtactggcaaaagccacagttactttt 70
Query: 79 gcaccaa 85
|||||||
Sbjct: 71 gcaccaa 77
>RF01061;mir-548;AANU01272376.1/8292-8209 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 8 tattaggttgatgcaaaagtaattggggttt 38
|||||||||| |||||||||||||| |||||
Sbjct: 84 tattaggttggtgcaaaagtaattgcggttt 54
>RF01061;mir-548;ABGA01227794.1/7074-6991 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 53/62 (85%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 12 aggttgatgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccggcaat 71
|||||| |||||||||||||| || |||||| |||| | ||||||| ||||| | |||||
Sbjct: 5 aggttggtgcaaaagtaattgcgg-tttttgccattgacagtagtggcaaaaaccgcaat 63
Query: 72 ta 73
||
Sbjct: 64 ta 65
>RF01061;mir-548;ABGA01320162.1/292-375 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 8 tattaggttgatgcaaaagtaattggggttttttgtcattaa 49
|||||||||| |||||||||||| | || |||||||||||||
Sbjct: 84 tattaggttggtgcaaaagtaatagcgg-tttttgtcattaa 44
>RF01061;mir-548;AC104441.2/115021-115102 9606:Homo sapiens
(human)
Length = 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 67 gcaattacttctgcaccaaactaata 92
||||||||||||||||||| ||||||
Sbjct: 26 gcaattacttctgcaccaacctaata 1
>RF01061;mir-548;AADC01126060.1/253363-253446 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 56/66 (84%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 19 tgcaaaagtaattggggttttttgtcattaaaagtagtgacaaaaccggcaattacttct 78
|||||||||||||| || |||||| |||||||| | || ||||| | |||||||||| |
Sbjct: 12 tgcaaaagtaattgcgg-tttttgccattaaaaacaatggcaaaaaccgcaattactttt 70
Query: 79 gcacca 84
||||||
Sbjct: 71 gcacca 76
>RF01061;mir-548;ABBA01074990.1/78349-78432 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 37 tttttgtcattaaaagtagtgacaaaaccggcaattac 74
|||||||||||||||||| || ||||| | ||||||||
Sbjct: 29 tttttgtcattaaaagtaatggcaaaaactgcaattac 66
