miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01036;mir-567;AANU01279133.1/11007-11100 9544:Macaca mulatta
(rhesus monkey)
Length = 94
Score = 155 bits (78), Expect = 1e-37
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 1 ggattcttacaggacactatgttcttccaggacagaacattctttgctattttgtactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggattcttacaggacactatgttcttccaggacagaacattctttgctattttgtactgg 60
Query: 61 aagaacatgcaaaacttt 78
||||||||||||||||||
Sbjct: 61 aagaacatgcaaaacttt 78
>RF01036;mir-567;ABDC01160933.1/3144-3236 30608:Microcebus murinus
(gray mouse lemur)
Length = 93
Score = 60.0 bits (30), Expect = 5e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 22 ttcttccaggacagaacattctttgctattttgtactggaagaacatgca 71
|||||| ||||||| ||| |||||||| |||||||||||||||||||||
Sbjct: 22 ttcttctaggacaggacaccctttgctactttgtactggaagaacatgca 71
>RF01036;mir-567;AAWR02012002.1/82097-82003 9796:Equus caballus
(horse)
Length = 95
Score = 52.0 bits (26), Expect = 1e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 21 gttcttccaggacagaacattctttgctattttgta-ctggaagaa 65
||||||| ||||||| ||| |||||||||||||||| |||||||||
Sbjct: 18 gttcttctaggacagtacactctttgctattttgtacctggaagaa 63
>RF01036;mir-567;AAQR01240958.1/2221-2313 30611:Otolemur garnettii
(small-eared galago)
Length = 93
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 43 tttgctattttgtactggaagaacatgca 71
|||||| ||||||||||||||||||||||
Sbjct: 43 tttgctgttttgtactggaagaacatgca 71
