miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01020;mir-572;AANU01106553.1/9481-9426 9544:Macaca mulatta
(rhesus monkey)
Length = 56
Score = 111 bits (56), Expect = 2e-24
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 25 tcggggccgccgcggacggaagggcgcctctgcttcgtccgctcggcggtggccca 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcggggccgccgcggacggaagggcgcctctgcttcgtccgctcggcggtggccca 56
>RF01020;mir-572;CABD01740844.2/986-1041 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 56
Score = 63.9 bits (32), Expect = 3e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 25 tcggggccgccgcggacggaagggcgcctctgcttcgtccgctcggcggtgg 76
|||||||||| |||| | |||||||||| ||||||||||||||||||||||
Sbjct: 1 tcggggccgctgcgggcagaagggcgcccgtgcttcgtccgctcggcggtgg 52
>RF01020;mir-572;AAQR01303091.1/6591-6649 30611:Otolemur garnettii
(small-eared galago)
Length = 59
Score = 60.0 bits (30), Expect = 5e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 27 ggggccgccgcggacggaagggcgcctctgcttcgtccgctc 68
|||||||| ||||||||||||||||| | |||||||||||||
Sbjct: 3 ggggccgcagcggacggaagggcgcccccgcttcgtccgctc 44
>RF01020;mir-572;ABRN01263601.1/303-359 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 57
Score = 50.1 bits (25), Expect = 5e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 25 tcggggccgccgcggacggaagggcgcctctgcttcgtccgctcggcgg 73
|||||||||| |||| |||||||||||| ||||||||||||| ||||
Sbjct: 1 tcggggccgcggcgggcggaagggcgccctcgcttcgtccgctctgcgg 49
