miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00051;mir-17;ABRP01096430.1/2803-2886 132908:Pteropus vampyrus
(large flying fox)
Length = 84
Score = 155 bits (78), Expect = 1e-37
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 cctgctggggctaaagtgctgacagtgcagatagtggtcctctccgtgctaccgcactgt 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2 cctgctggggctaaagtgctgacagtgcagatagtgatcctctccgtgctaccgcactgt 61
Query: 61 gggtacttgctgctccagcagg 82
||||||||||||||||||||||
Sbjct: 62 gggtacttgctgctccagcagg 83
>RF00051;mir-17;ABRQ01185186.1/4173-4256 9813:Procavia capensis
(cape rock hyrax)
Length = 84
Score = 115 bits (58), Expect = 9e-26
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 7 ggggctaaagtgctgacagtgcagatagtggtcctctccgtgctaccgcactgtgggtac 66
|||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 8 ggggttaaagtgctgacagtgcagatagtggtcctctgtgtgctaccgcactgtgggtac 67
Query: 67 ttgctgctcc 76
||||||||||
Sbjct: 68 ttgctgctcc 77
>RF00051;mir-17;AAEX02011501.1/32111-32192 9615:Canis lupus
familiaris (dog)
Length = 82
Score = 109 bits (55), Expect = 5e-24
Identities = 76/82 (92%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 1 cctgctggggctaaagtgctgacagtgcagatagtggtcctctccgtgctaccgcactgt 60
||||| || ||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 2 cctgccggtgctaaagtgctgacagtgcagatagcggtcctc--cgtgctaccgcactgt 59
Query: 61 gggtacttgctgctccagcagg 82
|||||||||||||||| |||||
Sbjct: 60 gggtacttgctgctccggcagg 81
