miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00699;mir-134;AAGW01206555.1/3367-3438 9986:Oryctolagus
cuniculus (rabbit)
Length = 72
Score = 113 bits (57), Expect = 3e-25
Identities = 70/73 (95%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
|||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||
Sbjct: 1 cagggtgtgtgactggttgaccagaggg-cgtgcgctgtgttcaccctgtgggccaccta 59
Query: 61 gtcaccaaccctc 73
|||||||||||||
Sbjct: 60 gtcaccaaccctc 72
>RF00699;mir-134;ABRP01151524.1/10866-10938 132908:Pteropus
vampyrus (large flying fox)
Length = 73
Score = 89.7 bits (45), Expect = 4e-18
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
|||||||||||||||| |||||||||| ||| ||||| ||||| ||| ||||||||||||
Sbjct: 1 cagggtgtgtgactggctgaccagaggtgcaagcactctgttccccccgtgggccaccta 60
Query: 61 gtcaccaaccctc 73
||||||| |||||
Sbjct: 61 gtcaccacccctc 73
