miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00748;mir-433;AAGU02774140.1/897-989 9785:Loxodonta africana
          (African savanna elephant)
          Length = 93

 Score =  184 bits (93), Expect = 1e-46
 Identities = 93/93 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccggggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgaga 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ccggggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgaga 60

                                           
Query: 61 aggatcatgatgggctcctcggtgttctccagg 93
          |||||||||||||||||||||||||||||||||
Sbjct: 61 aggatcatgatgggctcctcggtgttctccagg 93




>RF00748;mir-433;EU781030.3/2879-2787 9823:Sus scrofa (pig)
          Length = 93

 Score = 97.6 bits (49), Expect = 2e-20
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccggggagaagtacggtgagcctgtcattattcagagaggctagatcctctgtgttgaga 60
          |||||||| || |||||||||||||| || ||||| ||||| || ||||||| | |||||
Sbjct: 1  ccggggagcaggacggtgagcctgtcgttgttcagggaggccaggtcctctgggctgaga 60

                                           
Query: 61 aggatcatgatgggctcctcggtgttctccagg 93
          ||||| |||| ||||||||||||||||||||||
Sbjct: 61 aggattatgacgggctcctcggtgttctccagg 93