miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00793;mir-497;ABRQ01154875.1/189-78 9813:Procavia capensis (cape
rock hyrax)
Length = 112
Score = 180 bits (91), Expect = 3e-45
Identities = 97/99 (97%)
Strand = Plus / Plus
Query: 9 gtcctgctcccgccccagcagcacactgtggtttgtacggcactgtggccacgtccaaac 68
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 9 gtcctgctcccgccccagcagcacactgtggtttgtacggcattgtggccacgtccaaac 68
Query: 69 cacactgtggtgttagagcgagggtgggggaggcaccgc 107
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 69 cacactgtggtgttagagcgagggtgagggaggcaccgc 107
>RF00793;mir-497;ABRO01159172.1/3932-3821 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 112
Score = 172 bits (87), Expect = 6e-43
Identities = 90/91 (98%)
Strand = Plus / Plus
Query: 9 gtcctgctcccgccccagcagcacactgtggtttgtacggcactgtggccacgtccaaac 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gtcctgctcccgccccagcagcacactgtggtttgtacggcactgtggccacgtccaaac 68
Query: 69 cacactgtggtgttagagcgagggtggggga 99
||||||||||||||||||||||||| |||||
Sbjct: 69 cacactgtggtgttagagcgagggtagggga 99
>RF00793;mir-497;AAFR03049810.1/89806-89695 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 112
Score = 117 bits (59), Expect = 3e-26
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 18 ccgccccagcagcacactgtggtttgtacggcactgtggccacgtccaaaccacactgtg 77
||||||||||||||||||||||||||| | | | |||||| |||||||||||||||||
Sbjct: 18 ccgccccagcagcacactgtggtttgttcagtgttatggccaagtccaaaccacactgtg 77
Query: 78 gtgttagagcgagggtgggggaggcaccgcc 108
|||||||||||||||| ||||||||||||||
Sbjct: 78 gtgttagagcgagggtaggggaggcaccgcc 108
