miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00958;mir-498;AANU01181661.1/3192-3315 9544:Macaca mulatta
(rhesus monkey)
Length = 124
Score = 200 bits (101), Expect = 3e-51
Identities = 116/121 (95%)
Strand = Plus / Plus
Query: 4 cctccttgggaagtgaagctcaggctgtgatttcaagccagggggcgtttttctataact 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 4 cctccttgggaagtgaagctcaggctgtgatttcaagccagggggcgtttttctgtgact 63
Query: 64 ggatgaaaagcacctccagagcttgaagctcacagtttgagagcaatcgtctaaggaagt 123
||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||
Sbjct: 64 ggatgaaaagcacctccggggcttgaagctcacagtttgagagcaatcatctaaggaagt 123
Query: 124 t 124
|
Sbjct: 124 t 124
>RF00958;mir-498;EU086472.1/25818-25940 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 123
Score = 127 bits (64), Expect = 4e-29
Identities = 107/120 (89%), Gaps = 1/120 (0%)
Strand = Plus / Plus
Query: 1 aaccctccttgggaagtgaagctcaggctgtgatttcaagccagggggcgtttttctata 60
||||||||||||| ||||| |||||| |||||||||||||| ||||| |||||||| ||
Sbjct: 1 aaccctccttggggagtgatgctcagtctgtgatttcaagct-gggggtgtttttctgta 59
Query: 61 actggatgaaaagcacctccagagcttgaagctcacagtttgagagcaatcgtctaagga 120
||||||||||||||||| ||| ||||||| |||||||||||||||||| | ||||||||
Sbjct: 60 actggatgaaaagcacccgcagggcttgaacctcacagtttgagagcaagcatctaagga 119
>RF00958;mir-498;ABDC01595467.1/1102-983 30608:Microcebus murinus
(gray mouse lemur)
Length = 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 agtgaagctcaggctgtgatttcaagc 41
|||| ||||||||||||||||||||||
Sbjct: 13 agtgcagctcaggctgtgatttcaagc 39
