miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01061;mir-548;AANU01290519.1/8633-8716 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 77.8 bits (39), Expect = 2e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcag 72
||||||||| |||||||||||||||||||| ||| ||| ||| |||||| | |||| |||
Sbjct: 3 ttaggttggtgcaaaagtaattgtggttttcgccattacttttaatggcgaaaaccgcag 62
Query: 73 ttgcttttgtgccaaccta 91
|| |||||||| |||||||
Sbjct: 63 ttacttttgtgtcaaccta 81
>RF01061;mir-548;CABD01355261.2/2635-2552 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 71.9 bits (36), Expect = 1e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcag 72
|||||| ||| ||||||||||||||||||| ||| ||| |||||||||||| |||| ||
Sbjct: 82 ttaggtgggcacaaaagtaattgtggtttttgccattactttcaatggcaaaaaccgcaa 23
Query: 73 ttgcttttgtgccaacctaa 92
|| |||||| |||||||||
Sbjct: 22 ttacttttgctccaacctaa 3
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||||||| ||||||||||||| ||||||
Sbjct: 3 ttaggttggagcaaaagtaattgcggtttt 32
>RF01061;mir-548;CABD01009254.1/6580-6663 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctt 48
||||||||| ||||||||||||||||||||||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgtggttttggcctt 38
>RF01061;mir-548;AC117179.4/116901-116818 9606:Homo sapiens
(human)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 14 taggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaa 63
|||||||| ||||| |||||||||||||| ||| ||| ||||||||||||
Sbjct: 4 taggttggtgcaaacgtaattgtggtttttgccattactttcaatggcaa 53
>RF01061;mir-548;AADC01054028.1/147-64 9606:Homo sapiens (human)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcag 72
||||||||| ||||||||||||||| |||| ||| ||| ||| |||||||| ||| |
Sbjct: 3 ttaggttggtgcaaaagtaattgtgctttttgccattacttttaatggcaaaaactacga 62
Query: 73 ttgcttttgtgccaacctaata 94
||||||||| |||||||||||
Sbjct: 63 ttgcttttgcaccaacctaata 84
>RF01061;mir-548;ABSL01062835.1/19063-18980 9606:Homo sapiens
(human)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggca 62
||||||||| |||||||||||||||||||| ||| ||| ||| |||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgtggtttttgccattacttttaatggca 52
>RF01061;mir-548;AADC01144176.1/293955-294038 9606:Homo sapiens
(human)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 24 caaaagtaattgtggttttggcctttattttcaatggcaagaacctcagttgcttttgtg 83
|||||||| ||| |||||| ||| ||| ||||||||||||||||| || || ||||||
Sbjct: 71 caaaagtagttgcggtttttgccgttactttcaatggcaagaaccgcaattacttttgca 12
Query: 84 ccaacctaat 93
||||||||||
Sbjct: 11 ccaacctaat 2
>RF01061;mir-548;CABD01378151.1/10643-10726 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcag 72
||||||||| ||||||||||||||| |||| ||| | | |||||||||||| | || ||
Sbjct: 82 ttaggttggtgcaaaagtaattgtgatttttgccgtaactttcaatggcaaaatccacaa 23
Query: 73 ttgcttttgtgccaacctaata 94
|| |||||| |||||||||||
Sbjct: 22 tttcttttgcaccaacctaata 1
>RF01061;mir-548;CABD01346604.1/3997-4080 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcag 72
||||||||| |||||||||| || |||||| ||| | | || ||||||||| |||| ||
Sbjct: 82 ttaggttggtgcaaaagtaagtgcggtttttgccatcacttgcaatggcaaaaaccacaa 23
Query: 73 ttgcttttgtgccaacctaata 94
|| ||||||| |||||||||||
Sbjct: 22 ttacttttgtaccaacctaata 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||||||| |||||||||||||||||||
Sbjct: 3 ttaggttggtacaaaagtaattgtggtttt 32
>RF01061;mir-548;AADB02037333.1/77827-77910 9606:Homo sapiens
(human)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcag 72
||||||||| |||||||| ||||||||||| ||| ||| ||||| |||||| |||| |||
Sbjct: 3 ttaggttggtgcaaaagtgattgtggtttttgccattactttcagtggcaaaaaccacag 62
Query: 73 t 73
|
Sbjct: 63 t 63
>RF01061;mir-548;AC163751.3/6942-6859 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 56.0 bits (28), Expect = 9e-08
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacc 68
|||| |||| |||||||| |||| |||||| ||| |||||||||||||||| ||||
Sbjct: 82 ttagcttggtgcaaaagtgattgcggtttttgccattattttcaatggcaaaaacc 27
>RF01061;mir-548;AANU01230369.1/6404-6321 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 16 ggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcagttg 75
|||||| ||||||||||||||||| || | | ||| ||| |||||||| ||| |||||
Sbjct: 6 ggttggtgcaaaagtaattgtggtctttgtcattacttttaatggcaaagaccccagttc 65
Query: 76 cttttgtgccaacctaata 94
|||||| |||||||||||
Sbjct: 66 cttttgcaccaacctaata 84
>RF01061;mir-548;ABGA01354861.1/8138-8055 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||||||| ||||||||||||||||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgtggtttt 32
>RF01061;mir-548;AACZ02112099.1/25061-25144 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||||||| ||||||||||||||||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgtggtttt 32
>RF01061;mir-548;AACZ02147953.1/7033-7116 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||||||| ||||||||||||||||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgtggtttt 32
Score = 46.1 bits (23), Expect = 8e-05
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 16 ggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcagttg 75
|||||| |||||||||||| ||| ||| | ||| |||||||||||| |||| || ||
Sbjct: 79 ggttggtgcaaaagtaattatggcttttactattactttcaatggcaaaaaccacaatta 20
Query: 76 cttttgtgccaacctaata 94
|||||| |||||||||||
Sbjct: 19 cttttgcaccaacctaata 1
>RF01061;mir-548;AACZ02061421.1/862-945 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggca 62
|||||| || |||||||||||||||||||| ||| ||| ||| |||||||
Sbjct: 82 ttaggtcggtgcaaaagtaattgtggtttttgccattacttttaatggca 33
>RF01061;mir-548;AC074323.4/95680-95597 9606:Homo sapiens (human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 16 ggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcagttg 75
|||||| ||||||||||||| |||||| ||| ||| ||| |||||||| |||| || ||
Sbjct: 79 ggttggtgcaaaagtaattgcggtttttgccattacttttaatggcaaaaaccgcaatta 20
Query: 76 cttttg 81
||||||
Sbjct: 19 cttttg 14
>RF01061;mir-548;ABSL01068449.1/36486-36403 9606:Homo sapiens
(human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcag 72
|||||||||| | |||||||||| ||||| || ||| ||| |||||||| | || ||
Sbjct: 82 ttaggttggcacgaaagtaattgcagtttttaccattacttttaatggcaaaagccacaa 23
Query: 73 ttgcttttgtgccaacctaata 94
|| |||||||||||||||||||
Sbjct: 22 ttacttttgtgccaacctaata 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtgg 38
|||||||||| |||||||||||||||
Sbjct: 3 ttaggttggcacaaaagtaattgtgg 28
>RF01061;mir-548;AP001729.1/31449-31355 9606:Homo sapiens (human)
Length = 95
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||||||||||||||||||||| ||||||
Sbjct: 3 ttaggttggcgcaaaagtaattgcggtttt 32
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||||||||||||||||||||| ||||||
Sbjct: 93 ttaggttggcgcaaaagtaattgcggtttt 64
>RF01061;mir-548;AADC01102129.1/13137-13054 9606:Homo sapiens
(human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 14 taggttggcgcaaaagtaattgtggttttggcctttattttcaatg 59
|||||||| ||||||||||||| |||||| ||| ||| ||||||||
Sbjct: 81 taggttggtgcaaaagtaattgcggtttttgccattactttcaatg 36
>RF01061;mir-548;AADD01036043.1/27192-27275 9606:Homo sapiens
(human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcc 46
||||||||| ||||||||||||| ||||||||||
Sbjct: 82 ttaggttggtgcaaaagtaattgcggttttggcc 49
>RF01061;mir-548;CABD01343912.1/1154-1071 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcag 72
||||||||| ||||||||||||| |||||| ||| || | ||||||||| |||| ||
Sbjct: 3 ttaggttggtgcaaaagtaattgcggtttttgccattcctgccaatggcaaaaaccgcaa 62
Query: 73 ttgcttttgtgccaacctaa 92
|| ||||||| ||||||||
Sbjct: 63 ttrcttttgtatcaacctaa 82
>RF01061;mir-548;AC198186.3/82008-82091 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 24 caaaagtaattgtggttttggcctttattttcaatggcaagaacctcagttgcttttg 81
|||||||||||| |||||| ||| |||||| ||||||||| |||| || || ||||||
Sbjct: 71 caaaagtaattgcggtttttgccattatttccaatggcaaaaaccgcaattacttttg 14
>RF01061;mir-548;AANU01274414.1/2282-2365 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcag 72
|||||||| |||||||| ||| |||||||| ||| ||| ||| |||| ||| || | ||
Sbjct: 82 ttaggttgacgcaaaagcaatcgtggtttttgccattacttttaatgacaaaaatcgcaa 23
Query: 73 ttgcttttgtgccaacctaata 94
|| |||||| ||||||||||||
Sbjct: 22 ttacttttgcgccaacctaata 1
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattg 35
|||||||||||||||||||||||
Sbjct: 3 ttaggttggcgcaaaagtaattg 25
>RF01061;mir-548;AANU01124258.1/9508-9425 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcag 72
|||| |||| ||||||| |||||||||||| ||| ||| ||| | |||||||||| ||
Sbjct: 82 ttagtttggtgcaaaagaaattgtggtttttgccattacttttataggcaagaaccacaa 23
Query: 73 ttgcttttgtgccaacctaata 94
|| |||||| |||||||||||
Sbjct: 22 ttacttttgcaccaacctaata 1
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtt 40
||||||||| ||||||||||||||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgtggtt 30
>RF01061;mir-548;AADC01126060.1/253363-253446 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcag 72
||||| ||| ||||||||||||| |||||| ||| || |||| |||||||| |||| ||
Sbjct: 82 ttaggctggtgcaaaagtaattgcggtttttgccattgtttttaatggcaaaaaccgcaa 23
Query: 73 ttgcttttg 81
|| ||||||
Sbjct: 22 ttacttttg 14
>RF01061;mir-548;AADD01165731.1/6332-6415 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggttt 41
||||||||| |||||||||||||||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgtggttt 31
>RF01061;mir-548;AC121493.1/11246-11329 9606:Homo sapiens (human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttt 41
||||||||| |||||||||||||||||||
Sbjct: 82 ttaggttggtgcaaaagtaattgtggttt 54
>RF01061;mir-548;AANU01261834.1/7167-7084 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggttt 41
||||||||| |||||||||||||||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgtggttt 31
>RF01061;mir-548;AANU01270843.1/85523-85605 9544:Macaca mulatta
(rhesus monkey)
Length = 83
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 15 aggttggcgcaaaagtaattgtggttttg 43
||||||| |||||||||||||||||||||
Sbjct: 5 aggttggtgcaaaagtaattgtggttttg 33
>RF01061;mir-548;AANU01285209.1/57947-57864 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 12 tttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacc 68
|||||||||| ||||||||||||| |||||| | | ||| ||| |||||||| ||||
Sbjct: 83 tttaggttggtgcaaaagtaattgcggtttttgtcattacttttaatggcaaaaacc 27
>RF01061;mir-548;AANU01123316.1/10409-10492 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcag 72
||||| ||| ||||||||||||| ||||| ||| ||| ||||||||| || |||| |||
Sbjct: 82 ttaggctggtgcaaaagtaattgcagtttttgccattactttcaatgggaaaaaccacag 23
Query: 73 ttgcttttg 81
|| ||||||
Sbjct: 22 ttacttttg 14
>RF01061;mir-548;ABGA01320162.1/292-375 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacc 68
||||||||| ||||||||||| | |||||| | | ||| |||||||||||| ||||
Sbjct: 82 ttaggttggtgcaaaagtaatagcggtttttgtcattaatttcaatggcaaaaacc 27
>RF01061;mir-548;AADA01058244.1/14119-14036 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatgg 60
||||||||| ||||||||||||| | |||| ||| ||| |||||||||
Sbjct: 82 ttaggttggggcaaaagtaattgcgatttttgccattactttcaatgg 35
>RF01061;mir-548;AADB02015244.1/579799-579882 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 16 ggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaa 63
|||||| ||||||||||||||| || | ||| ||| ||||||||||||
Sbjct: 79 ggttggtgcaaaagtaattgtgcttgttgccattactttcaatggcaa 32
>RF01061;mir-548;AL157365.19/15987-15904 9606:Homo sapiens (human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacc 68
||||||||| ||||| ||||| |||| ||| ||| ||| |||||||||||| ||||
Sbjct: 82 ttaggttggtgcaaatgtaatcgtggcttttgccattactttcaatggcaaaaacc 27
>RF01061;mir-548;CABD01078688.1/32-114 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 83
Score = 48.1 bits (24), Expect = 2e-05
Identities = 68/82 (82%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcag 72
||||||||| ||||||||||| | ||||| ||| ||||||||||| |||| ||| |
Sbjct: 81 ttaggttggtgcaaaagtaatcgcagtttt-gccattattttcaatrgcaaaaactgcga 23
Query: 73 ttgcttttgtgccaacctaata 94
|| |||||| ||||||||||||
Sbjct: 22 ttacttttgcgccaacctaata 1
>RF01061;mir-548;AADA01051643.1/6626-6709 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaa 63
|||| |||| ||||||||||||||||| | ||| ||| ||||||||||||
Sbjct: 82 ttagtttggtgcaaaagtaattgtggtcattgccattactttcaatggcaa 32
>RF01061;mir-548;AC068058.12/13722-13805 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaa 63
||||||||| |||||||||||||||| ||| ||| ||| ||| || |||||
Sbjct: 82 ttaggttggtgcaaaagtaattgtgggttttgccattagttttaaaggcaa 32
>RF01061;mir-548;AADC01117423.1/979850-979767 9606:Homo sapiens
(human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 16 ggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcagttg 75
|||||| | |||||||||||||||||| || ||| ||| |||||||| |||| || ||
Sbjct: 79 ggttggtgtaaaagtaattgtggtttttgcaattacttttaatggcaaaaaccgcaatta 20
Query: 76 cttttgtgccaacctaata 94
|||||| |||||| ||||
Sbjct: 19 cttttgcaccaaccgaata 1
>RF01061;mir-548;AC003681.1/24588-24671 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 tttaggttggcgcaaaagtaattgtggtttt 42
||||| |||| ||||||||||||||||||||
Sbjct: 2 tttagattggtgcaaaagtaattgtggtttt 32
>RF01061;mir-548;AC090451.6/112413-112496 9606:Homo sapiens
(human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaa 63
||||||||| |||||||| ||||||||||| || ||| ||| ||||||||
Sbjct: 3 ttaggttggtgcaaaagtgattgtggtttttgctgttacttttaatggcaa 53
>RF01061;mir-548;CABD01203916.1/289-206 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaa 63
||||||||| || |||||||||| | |||| ||| ||| ||||||||||||
Sbjct: 82 ttaggttggtgccaaagtaattgcgatttttgccattactttcaatggcaa 32
>RF01061;mir-548;AANU01235723.1/7676-7593 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaa 63
||||||||| |||||||||||| | ||||||| ||| ||||||||||||
Sbjct: 82 ttaggttggtacaaaagtaattgcagctttggccattactttcaatggcaa 32
>RF01061;mir-548;AANU01283759.1/9595-9678 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 24 caaaagtaattgtggttttggcctttattttcaatggcaagaacctcagttgcttttgtg 83
|||||||||||| ||||| ||| ||| ||| |||| ||| |||| || |||||||||
Sbjct: 71 caaaagtaattgcagtttttgccattacttttaatgacaaaaaccacaaatgcttttgta 12
Query: 84 ccaacctaata 94
|||||||||||
Sbjct: 11 ccaacctaata 1
>RF01061;mir-548;ABBA01068880.1/357-274 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||||||| ||||||||||||| ||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;AC111199.4/17434-17350 9606:Homo sapiens (human)
Length = 85
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
|||||||| ||||||||||||||||||||
Sbjct: 3 ttaggttgatgcaaaagtaattgtggtttt 32
>RF01061;mir-548;AADC01094388.1/15092-15175 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||||||| |||||||| |||||||||||
Sbjct: 3 ttaggttggggcaaaagtcattgtggtttt 32
>RF01061;mir-548;AC117444.6/85961-86044 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||||||| ||||||||||||| ||||||
Sbjct: 82 ttaggttggtgcaaaagtaattgcggtttt 53
>RF01061;mir-548;ABSL01029623.1/494-577 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||||||| ||||||||||||| ||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;AC099678.2/65387-65470 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||||||| ||| ||||||||||||||||
Sbjct: 3 ttaggttggtgcacaagtaattgtggtttt 32
>RF01061;mir-548;CABD01532844.1/1136-1053 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcag 72
||||||||| ||||| ||| |||||| ||| ||| ||| ||| |||||||| |||| ||
Sbjct: 3 ttaggttggtgcaaatgtagttgtggcttttgccattacttttaatggcaaaaaccacaa 62
Query: 73 ttgcttttgtgccaacctaata 94
||| |||| |||||||||||
Sbjct: 63 ttgtgtttgcaccaacctaata 84
>RF01061;mir-548;CABD01142179.1/4659-4576 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcag 72
||||||||| |||||||||||||| |||| ||| | | ||| |||||||| ||| ||
Sbjct: 82 ttaggttggtgcaaaagtaattgttatttttgccatgacttttaatggcaaaaacagcac 23
Query: 73 ttgcttttgtgccaacctaata 94
|| |||||| |||||||||||
Sbjct: 22 ttacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01089019.1/6160-6243 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||||||| ||||||||||||| ||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;CABD01688067.1/1028-1113 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 86
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||||||| ||||||||||||| ||||||
Sbjct: 84 ttaggttggtgcaaaagtaattgcggtttt 55
>RF01061;mir-548;CABD01075799.2/302-219 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcag 72
||||||||| |||||||||||| | ||| || ||| |||||||||||| | || |||
Sbjct: 82 ttaggttggtacaaaagtaattgcagcttttaccattactttcaatggcaaaagccgcag 23
Query: 73 ttgcttttgtgccaacctaata 94
|| |||||| |||||||||||
Sbjct: 22 ttacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01524540.2/42-125 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 gttggcgcaaaagtaattgtggtttt 42
||||| ||||||||||||||||||||
Sbjct: 7 gttggagcaaaagtaattgtggtttt 32
>RF01061;mir-548;CABD01007255.1/6013-6096 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||| ||| ||||||||||||||||||||
Sbjct: 3 ttaggctggtgcaaaagtaattgtggtttt 32
>RF01061;mir-548;CABD01022860.2/18560-18643 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
|||||||| ||||||||||||||||||||
Sbjct: 3 ttaggttgctgcaaaagtaattgtggtttt 32
>RF01061;mir-548;AANU01112255.1/642-725 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
|||||| || ||||||||||||||||||||
Sbjct: 3 ttaggtgggtgcaaaagtaattgtggtttt 32
>RF01061;mir-548;AANU01170885.1/1-85 9544:Macaca mulatta (rhesus
monkey)
Length = 85
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||||||| ||||||||||||| ||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;AC202678.6/146907-146824 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 17 gttggcgcaaaagtaattgtggttttggcctttattttcaatggcaagaacctcagttgc 76
||||| ||||||||||||| ||| || ||| ||| |||||||| ||| |||| || || |
Sbjct: 78 gttggtgcaaaagtaattgcggtctttgccattactttcaatgacaaaaaccgcaattac 19
Query: 77 ttttgtgccaacct 90
||||| |||||||
Sbjct: 18 ttttgcaccaacct 5
>RF01061;mir-548;AANU01248525.1/14264-14347 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgtggtttt 42
||||||||| |||||||||||| |||||||
Sbjct: 3 ttaggttggtgcaaaagtaattatggtttt 32
>RF00015;U4;AAPY01611593.1/548-750 37347:Tupaia belangeri (northern
tree shrew)
Length = 203
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgtgg 38
||||||||| ||||||||||||||||
Sbjct: 104 ttaggttggtgcaaaagtaattgtgg 79
