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BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00742;MIR162_2;AK073954.1/290-447 39947:Oryza sativa Japonica
           Group
          Length = 158

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 95  ggaatcgatcgataaacctctgcgtccagt 124
           ||||||||||||||||||||||| ||||||
Sbjct: 129 ggaatcgatcgataaacctctgcatccagt 158

>RF00742;MIR162_2;AAAA02006876.1/21311-21153 39946:Oryza sativa
           Indica Group
          Length = 159

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 95  ggaatcgatcgataaacctctgcgtccagt 124
           ||||||||||||||||||||||| ||||||
Sbjct: 130 ggaatcgatcgataaacctctgcatccagt 159

>RF00742;MIR162_2;ABXC01002838.1/886-1017 4558:Sorghum bicolor
           (sorghum)
          Length = 132

 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 95  ggaatcgatcgataaacctctgcgtccag 123
           ||||||||||||||||||||||| |||||
Sbjct: 103 ggaatcgatcgataaacctctgcatccag 131

>RF00742;MIR162_2;ABIM01004242.1/4343-4433 3649:Carica papaya
           (papaya)
          Length = 91

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 96  gaatcgatcgataaacctctgcgtccag 123
           |||||||||||||||||||||| |||||
Sbjct: 63  gaatcgatcgataaacctctgcatccag 90

>RF00742;MIR162_2;AB006708.1/30672-30582 3702:Arabidopsis thaliana
           (thale cress)
          Length = 91

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 96  gaatcgatcgataaacctctgcgtccag 123
           |||||||||||||||||||||| |||||
Sbjct: 63  gaatcgatcgataaacctctgcatccag 90

>RF00742;MIR162_2;AASG02018381.1/677-582 3988:Ricinus communis
           (castor bean)
          Length = 96

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 96  gaatcgatcgataaacctctgcgtccag 123
           |||||||||||||||||||||| |||||
Sbjct: 68  gaatcgatcgataaacctctgcatccag 95

>RF00742;MIR162_2;AACV01010015.1/69608-69724 39947:Oryza sativa
           Japonica Group
          Length = 117

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 94  aggaatcgatcgataaacctctgcgtccag 123
           |||||||||||||||| ||||||| |||||
Sbjct: 87  aggaatcgatcgataagcctctgcatccag 116