miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01042;mir-891;ABSL01111450.1/3190-3112 9606:Homo sapiens
(human)
Length = 79
Score = 157 bits (79), Expect = 2e-38
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 ccttaatccttgcaacgaacctgagccactgattcagtaaaatactcagtggcacatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccttaatccttgcaacgaacctgagccactgattcagtaaaatactcagtggcacatgtt 60
Query: 61 tgttgtgagggtcaaaaga 79
|||||||||||||||||||
Sbjct: 61 tgttgtgagggtcaaaaga 79
>RF01042;mir-891;AANU01202537.1/38748-38670 9544:Macaca mulatta
(rhesus monkey)
Length = 79
Score = 93.7 bits (47), Expect = 3e-19
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 1 ccttaatccttgcaacgaacctgagccactgattcagtaaaatactcagtggcacatgtt 60
|||||||||||||||| ||||||| || ||||||||||||| | ||| |||||||||||
Sbjct: 1 ccttaatccttgcaacttacctgagtcattgattcagtaaaacattcaatggcacatgtt 60
Query: 61 tgttgtgagggtcaaaaga 79
|||||| ||||||||||||
Sbjct: 61 tgttgttagggtcaaaaga 79
>RF01042;mir-891;ABRT010347702.1/1469-1391 9478:Tarsius syrichta
(Philippine tarsier)
Length = 79
Score = 54.0 bits (27), Expect = 3e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 3 ttaatccttgcaacgaacctgagccactgattcagtaaaatactcagtggcacatgtttg 62
|||||||| |||| |||||| | || ||| ||||||||| | ||| |||||| ||||||
Sbjct: 3 ttaatcctcacaacaaacctgtggcaatgagtcagtaaaacattcattggcacgtgtttg 62
Query: 63 ttgtgagggtc 73
|||||||||||
Sbjct: 63 ttgtgagggtc 73
>RF01042;mir-891;ABRT010099431.1/4448-4370 9478:Tarsius syrichta
(Philippine tarsier)
Length = 79
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gcacatgtttgttgtgagggtcaa 75
||||||||||||||||||||||||
Sbjct: 52 gcacatgtttgttgtgagggtcaa 75
>RF01042;mir-891;ABRT010299639.1/4382-4460 9478:Tarsius syrichta
(Philippine tarsier)
Length = 79
Score = 46.1 bits (23), Expect = 6e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 37 gtaaaatactcagtggcacatgtttgttgtgagggtcaa 75
|||||| | ||| ||||||| ||||||||||||||||||
Sbjct: 37 gtaaaacattcactggcacacgtttgttgtgagggtcaa 75
>RF01042;mir-891;ABRT010099436.1/6142-6064 9478:Tarsius syrichta
(Philippine tarsier)
Length = 79
Score = 46.1 bits (23), Expect = 6e-05
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 13 caacgaacctgagccactgattcagtaaaatactcagtggcacatgtttgttgtgaggg 71
|||| |||||| | || ||| ||||||||| | ||| |||||||||||||||||||||
Sbjct: 13 caacaaacctgtggcagtgagtcagtaaaacattcacaggcacatgtttgttgtgaggg 71
