miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01059;mir-598;ABRM01087269.1/1609-1523 6085:Hydra
magnipapillata
Length = 87
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcatta 67
|||||||||||||||||||||||||
Sbjct: 52 atcattgtcatcatcatcatcatta 28
>RF01059;mir-598;ABRM01000786.1/3504-3560 6085:Hydra
magnipapillata
Length = 57
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcatta 67
|||||||||||||||||||||||||
Sbjct: 25 atcattgtcatcatcatcatcatta 1
>RF01059;mir-598;AAGJ02094194.1/15159-15254
7668:Strongylocentrotus purpuratus
Length = 96
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcat 65
|||||||||||||||||||||||
Sbjct: 25 atcattgtcatcatcatcatcat 3
>RF01059;mir-598;ABRM01035246.1/6385-6290 6085:Hydra
magnipapillata
Length = 96
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcat 65
|||||||||||||||||||||||
Sbjct: 49 atcattgtcatcatcatcatcat 27
>RF01059;mir-598;ABRM01011862.1/18311-18216 6085:Hydra
magnipapillata
Length = 96
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcat 65
|||||||||||||||||||||||
Sbjct: 55 atcattgtcatcatcatcatcat 33
>RF01059;mir-598;ABRM01033922.1/9411-9312 6085:Hydra
magnipapillata
Length = 100
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcat 65
|||||||||||||||||||||||
Sbjct: 62 atcattgtcatcatcatcatcat 40
>RF01059;mir-598;ABRM01043206.1/3412-3504 6085:Hydra
magnipapillata
Length = 93
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcat 65
|||||||||||||||||||||||
Sbjct: 31 atcattgtcatcatcatcatcat 9
>RF01059;mir-598;ABRM01002742.1/14083-13988 6085:Hydra
magnipapillata
Length = 96
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcat 65
|||||||||||||||||||||||
Sbjct: 61 atcattgtcatcatcatcatcat 39
>RF01059;mir-598;ABRM01000416.1/4747-4653 6085:Hydra
magnipapillata
Length = 95
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcat 65
|||||||||||||||||||||||
Sbjct: 55 atcattgtcatcatcatcatcat 33
>RF01059;mir-598;ABRM01010122.1/22061-22156 6085:Hydra
magnipapillata
Length = 96
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcat 65
|||||||||||||||||||||||
Sbjct: 58 atcattgtcatcatcatcatcat 36
>RF01059;mir-598;ABRM01017079.1/10859-10951 6085:Hydra
magnipapillata
Length = 93
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcat 65
|||||||||||||||||||||||
Sbjct: 49 atcattgtcatcatcatcatcat 27
>RF01059;mir-598;ABRM01003306.1/8611-8522 6085:Hydra
magnipapillata
Length = 90
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcat 65
|||||||||||||||||||||||
Sbjct: 52 atcattgtcatcatcatcatcat 30
>RF01059;mir-598;ABRM01099734.1/1386-1291 6085:Hydra
magnipapillata
Length = 96
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcat 65
|||||||||||||||||||||||
Sbjct: 58 atcattgtcatcatcatcatcat 36
>RF01059;mir-598;ABRM01016977.1/3180-3275 6085:Hydra
magnipapillata
Length = 96
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcat 65
|||||||||||||||||||||||
Sbjct: 58 atcattgtcatcatcatcatcat 36
>RF01059;mir-598;ABRM01211628.1/270-205 6085:Hydra magnipapillata
Length = 66
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 atcattgtcatcatcatcatcat 65
|||||||||||||||||||||||
Sbjct: 36 atcattgtcatcatcatcatcat 58
>RF01059;mir-598;AAFR03057021.1/77045-77122 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 78
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcat 65
|||||||||||||||||||||||
Sbjct: 46 atcattgtcatcatcatcatcat 24
>RF01059;mir-598;AAEX02008993.1/28085-28180 9615:Canis lupus
familiaris (dog)
Length = 96
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 atcattgtcatcatcatcatcat 65
|||||||||||||||||||||||
Sbjct: 72 atcattgtcatcatcatcatcat 94
>RF01059;mir-598;AAWZ01031983.1/17803-17875 28377:Anolis
carolinensis (green anole)
Length = 73
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcat 65
|||||||||||||||||||||||
Sbjct: 31 atcattgtcatcatcatcatcat 9
>RF01059;mir-598;AACY020964275.1/397-520 408172:marine metagenome
Length = 124
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 44 tcattgtcatcatcatcatcat 65
||||||||||||||||||||||
Sbjct: 30 tcattgtcatcatcatcatcat 9
>RF01059;mir-598;AAGJ02026404.1/6710-6820 7668:Strongylocentrotus
purpuratus
Length = 111
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 42 tatcattgtcatcatcatcatcatta 67
||||||| ||||||||||||||||||
Sbjct: 80 tatcattatcatcatcatcatcatta 105
>RF01059;mir-598;ABRM01011111.1/15502-15410 6085:Hydra
magnipapillata
Length = 93
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatca 64
||||||||||||||||||||||
Sbjct: 55 atcattgtcatcatcatcatca 34
>RF01059;mir-598;ABRM01001535.1/25512-25414 6085:Hydra
magnipapillata
Length = 99
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatca 64
||||||||||||||||||||||
Sbjct: 58 atcattgtcatcatcatcatca 37
>RF01059;mir-598;ABRM01169276.1/868-957 6085:Hydra magnipapillata
Length = 90
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatca 64
||||||||||||||||||||||
Sbjct: 55 atcattgtcatcatcatcatca 34
>RF01059;mir-598;ABRM01053893.1/3661-3732 6085:Hydra
magnipapillata
Length = 72
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatca 64
||||||||||||||||||||||
Sbjct: 34 atcattgtcatcatcatcatca 13
>RF01059;mir-598;ABRM01010227.1/14626-14535 6085:Hydra
magnipapillata
Length = 92
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatca 64
||||||||||||||||||||||
Sbjct: 54 atcattgtcatcatcatcatca 33
>RF01059;mir-598;ABRM01006112.1/23133-23228 6085:Hydra
magnipapillata
Length = 96
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatca 64
||||||||||||||||||||||
Sbjct: 55 atcattgtcatcatcatcatca 34
>RF01059;mir-598;ABRM01160479.1/1200-1108 6085:Hydra
magnipapillata
Length = 93
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 43 atcattgtcatcatcatcatca 64
||||||||||||||||||||||
Sbjct: 45 atcattgtcatcatcatcatca 66
>RF01059;mir-598;ABRM01003126.1/9673-9584 6085:Hydra
magnipapillata
Length = 90
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatca 64
||||||||||||||||||||||
Sbjct: 55 atcattgtcatcatcatcatca 34
>RF01059;mir-598;AAPE01411907.1/1553-1644 59463:Myotis lucifugus
(little brown bat)
Length = 92
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 44 tcattgtcatcatcatcatcat 65
||||||||||||||||||||||
Sbjct: 45 tcattgtcatcatcatcatcat 24
>RF01059;mir-598;AAWZ01008677.1/75299-75231 28377:Anolis
carolinensis (green anole)
Length = 69
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 42 tatcattgtcatcatcatcatcatta 67
||||||| ||||||||||||||||||
Sbjct: 38 tatcattatcatcatcatcatcatta 63
>RF01059;mir-598;AAWZ01043223.1/23523-23593 28377:Anolis
carolinensis (green anole)
Length = 71
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 tgtatcattgtcatcatcatcatcat 65
||||||||| ||||||||||||||||
Sbjct: 38 tgtatcattatcatcatcatcatcat 63
>RF01059;mir-598;AASC02056842.1/2079-1955 6500:Aplysia californica
(California sea hare)
Length = 125
Score = 42.1 bits (21), Expect = 9e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 42 tatcattgtcatcatcatcatcattacca 70
|||||| ||||||||||||||||| ||||
Sbjct: 38 tatcatcgtcatcatcatcatcatcacca 10
>RF01059;mir-598;AASC02016621.1/7420-7293 6500:Aplysia californica
(California sea hare)
Length = 128
Score = 42.1 bits (21), Expect = 9e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 37 tgatgtatcattgtcatcatcatcatcat 65
||||||||||| ||||||||||||||||
Sbjct: 49 tgatgtatcatcatcatcatcatcatcat 21
>RF01059;mir-598;AASC02025161.1/7297-7385 6500:Aplysia californica
(California sea hare)
Length = 89
Score = 42.1 bits (21), Expect = 9e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 50 tcatcatcatcatcattacca 70
|||||||||||||||||||||
Sbjct: 36 tcatcatcatcatcattacca 16
>RF01059;mir-598;AAGJ02099002.1/373-279 7668:Strongylocentrotus
purpuratus
Length = 95
Score = 42.1 bits (21), Expect = 9e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatc 63
|||||||||||||||||||||
Sbjct: 36 atcattgtcatcatcatcatc 16
>RF01059;mir-598;ABRM01063795.1/3321-3416 6085:Hydra
magnipapillata
Length = 96
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcatta 67
|||||||||||||||||||| ||||
Sbjct: 58 atcattgtcatcatcatcataatta 34
>RF01059;mir-598;ABRM01049720.1/5833-5928 6085:Hydra
magnipapillata
Length = 96
Score = 42.1 bits (21), Expect = 9e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 50 tcatcatcatcatcattacca 70
|||||||||||||||||||||
Sbjct: 72 tcatcatcatcatcattacca 52
>RF01059;mir-598;ABRM01004188.1/22474-22554 6085:Hydra
magnipapillata
Length = 81
Score = 42.1 bits (21), Expect = 9e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 50 tcatcatcatcatcattacca 70
|||||||||||||||||||||
Sbjct: 39 tcatcatcatcatcattacca 19
>RF01059;mir-598;ABRM01002136.1/19704-19609 6085:Hydra
magnipapillata
Length = 96
Score = 42.1 bits (21), Expect = 9e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 44 tcattgtcatcatcatcatca 64
|||||||||||||||||||||
Sbjct: 54 tcattgtcatcatcatcatca 34
>RF01059;mir-598;ABRM01031516.1/3971-4060 6085:Hydra
magnipapillata
Length = 90
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcatta 67
|||||||||||||||||||| ||||
Sbjct: 55 atcattgtcatcatcatcataatta 31
>RF01059;mir-598;ABRM01020601.1/6945-6867 6085:Hydra
magnipapillata
Length = 79
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 43 atcattgtcatcatcatcatcatta 67
|||||| ||||||||||||||||||
Sbjct: 46 atcattatcatcatcatcatcatta 70
>RF01059;mir-598;ABRM01142500.1/1506-1411 6085:Hydra
magnipapillata
Length = 96
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcatta 67
|||||||||||||| ||||||||||
Sbjct: 31 atcattgtcatcataatcatcatta 7
>RF01059;mir-598;ABRO01057109.1/1198-1291 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 94
Score = 42.1 bits (21), Expect = 9e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatc 63
|||||||||||||||||||||
Sbjct: 40 atcattgtcatcatcatcatc 20
>RF01059;mir-598;CT027704.5/21824-21922 7955:Danio rerio
(zebrafish)
Length = 99
Score = 42.1 bits (21), Expect = 9e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 50 tcatcatcatcatcattacca 70
|||||||||||||||||||||
Sbjct: 27 tcatcatcatcatcattacca 7
>RF01059;mir-598;AAZO01006152.1/13687-13589 121224:Pediculus
humanus corporis (human body louse)
Length = 99
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcatta 67
||||| |||||||||||||||||||
Sbjct: 55 atcatcgtcatcatcatcatcatta 31
>RF01059;mir-598;AAZO01000764.1/10530-10621 121224:Pediculus
humanus corporis (human body louse)
Length = 92
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 43 atcattgtcatcatcatcatcatta 67
|||||| ||||||||||||||||||
Sbjct: 31 atcattatcatcatcatcatcatta 7
>RF00100;7SK;AALT01488544.1/2548-2833 42254:Sorex araneus (European
shrew)
Length = 286
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 43 atcattgtcatcatcatcatcatta 67
||||| |||||||||||||||||||
Sbjct: 230 atcatcgtcatcatcatcatcatta 254
