miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02009787.1/33052-32959 39946:Oryza sativa
          Indica Group
          Length = 94

 Score = 46.1 bits (23), Expect = 3e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 aatactccatccgtcccataata 33
          |||||||||||||||||||||||
Sbjct: 3  aatactccatccgtcccataata 25

>RF00906;MIR1122;AL442105.2/58754-58619 4530:Oryza sativa (rice)
          Length = 136

 Score = 46.1 bits (23), Expect = 3e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 11  aatactccatccgtcccataata 33
           |||||||||||||||||||||||
Sbjct: 134 aatactccatccgtcccataata 112

>RF00906;MIR1122;AL606691.4/149690-149555 39947:Oryza sativa
           Japonica Group
          Length = 136

 Score = 46.1 bits (23), Expect = 3e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 11  aatactccatccgtcccataata 33
           |||||||||||||||||||||||
Sbjct: 134 aatactccatccgtcccataata 112