miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EF059989.1/222136-222013 29664:Brachypodium
sylvaticum
Length = 124
Score = 139 bits (70), Expect = 2e-32
Identities = 110/122 (90%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 7 acagtactccctccgattctaaattgttatcaaaatattacaggtatttagagacttttt 66
||||||||||||||||| ||||||| || || |||||||||| |||| |||| | ||||
Sbjct: 1 acagtactccctccgatcctaaattattgtcgaaatattacatgtatctagacgcgtttt 60
Query: 67 aagaatagatacatccatatttgagcaaatttgagacaagaatttaggatcggaggaagt 126
||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||
Sbjct: 61 aagaatagatacatccatatttgggcaaatttgagacaagaattta-gatcggagggagt 119
Query: 127 ac 128
||
Sbjct: 120 ac 121
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 211 gtctagatacatgtaatatttcgacaagaatt 242
||||||||||||||||||||||||||| ||||
Sbjct: 53 gtctagatacatgtaatatttcgacaataatt 22
>RF00906;MIR1122;EF059989.1/55128-55252 29664:Brachypodium
sylvaticum
Length = 125
Score = 135 bits (68), Expect = 4e-31
Identities = 107/120 (89%)
Strand = Plus / Plus
Query: 8 cagtactccctccgattctaaattgttatcaaaatattacaggtatttagagacttttta 67
|||||||||||| ||| |||||||||| || |||||||||| |||| |||| |||||||
Sbjct: 2 cagtactccctctgatcctaaattgttgtcgaaatattacatgtatctagacgcttttta 61
Query: 68 agaatagatacatccatatttgagcaaatttgagacaagaatttaggatcggaggaagta 127
|||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||| ||||
Sbjct: 62 agaatagatatatccatatttgggcaaatttgagtcaagaatttaggatcagagggagta 121
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 211 gtctagatacatgtaatatttcgacaagaatt 242
||||||||||||||||||||||||||| ||||
Sbjct: 53 gtctagatacatgtaatatttcgacaacaatt 22
>RF00906;MIR1122;EU730902.1/127235-127359 15368:Brachypodium
distachyon
Length = 125
Score = 119 bits (60), Expect = 2e-26
Identities = 94/105 (89%), Gaps = 4/105 (3%)
Strand = Plus / Minus
Query: 145 ctccgttccataattcttgtctcaaatttgtctaaaagtggatgtacgtatcttttccta 204
|||||||||||||||||||||||||||||| | |||| |||||||| ||| ||||||
Sbjct: 115 ctccgttccataattcttgtctcaaatttgcccaaaattggatgta----tctattccta 60
Query: 205 aagaatgtctagatacatgtaatatttcgacaagaattatggaac 249
|| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 59 aaaagcgtctagatacatgtaatatttcgacaagaattatggaac 15
Score = 81.8 bits (41), Expect = 5e-15
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 39 aaatattacaggtatttagagactttttaagaatagatacatccatatttgagcaaattt 98
|||||||||| |||| |||| ||||||| ||||||||||||||| |||| ||||||||
Sbjct: 33 aaatattacatgtatctagacgctttttaggaatagatacatccaattttgggcaaattt 92
Query: 99 gagacaagaatttaggatcggaggaagta 127
|||||||||||| ||| |||||| ||||
Sbjct: 93 gagacaagaattatggaacggagggagta 121
>RF00906;MIR1122;EU730899.1/90906-91030 15368:Brachypodium
distachyon
Length = 125
Score = 101 bits (51), Expect = 5e-21
Identities = 94/108 (87%), Gaps = 4/108 (3%)
Strand = Plus / Minus
Query: 145 ctccgttccataattcttgtctcaaatttgtctaaaagtggatgtacgtatcttttccta 204
|||||||| ||||||||||||||||||||| | |||| ||| | |||||| ||||||
Sbjct: 115 ctccgttcgataattcttgtctcaaatttgaccaaaa----atgaatgtatctattccta 60
Query: 205 aagaatgtctagatacatgtaatatttcgacaagaattatggaacgga 252
|| | ||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 59 aaaagtgtctagatacatgtaatatttcaacaagaattatgaaacgga 12
Score = 81.8 bits (41), Expect = 5e-15
Identities = 86/101 (85%)
Strand = Plus / Plus
Query: 10 gtactccctccgattctaaattgttatcaaaatattacaggtatttagagactttttaag 69
|||||||||||| ||| |||| || | |||||||||| |||| |||| |||||||| |
Sbjct: 4 gtactccctccgtttcataattcttgttgaaatattacatgtatctagacactttttagg 63
Query: 70 aatagatacatccatatttgagcaaatttgagacaagaatt 110
||||||||||| ||| |||| |||||||||||||||||||
Sbjct: 64 aatagatacattcatttttggtcaaatttgagacaagaatt 104
>RF00906;MIR1122;EU730902.1/42384-42258 15368:Brachypodium
distachyon
Length = 127
Score = 99.6 bits (50), Expect = 2e-20
Identities = 96/110 (87%), Gaps = 6/110 (5%)
Strand = Plus / Plus
Query: 145 ctccgttccataattcttgtctcaaatttgtctaaaagtggatgtacgtatcttttccta 204
|||||||||||||||||||||||||||| | |||| |||||||| ||| ||||||
Sbjct: 11 ctccgttccataattcttgtctcaaattaacccaaaaatggatgta----tctattccta 66
Query: 205 aagaat--gtctagatacatgtaatatttcgacaagaattatggaacgga 252
|| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aaaaacacgtctagatacatgtaatatttcgacaagaattatggaacgga 116
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 62 tttttaagaatagatacatccatatttgagcaaatttgagacaagaatttaggatcggag 121
|||||| |||||||||||||||| |||| | ||||||||||||||||| ||| |||||
Sbjct: 70 tttttaggaatagatacatccatttttgggttaatttgagacaagaattatggaacggag 11
Query: 122 gaagta 127
| ||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;EU730901.1/108914-109038 15368:Brachypodium
distachyon
Length = 125
Score = 99.6 bits (50), Expect = 2e-20
Identities = 93/107 (86%), Gaps = 4/107 (3%)
Strand = Plus / Plus
Query: 145 ctccgttccataattcttgtctcaaatttgtctaaaagtggatgtacgtatcttttccta 204
|||||||||||||||||||||||||| ||| |||| ||||| |||||| ||| ||
Sbjct: 11 ctccgttccataattcttgtctcaaagttgctcaaaaatggat----gtatctattcata 66
Query: 205 aagaatgtctagatacatgtaatatttcgacaagaattatggaacgg 251
|| | ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 67 aaaagtgtctagatacatgtaagatttcgacaagaattatggaacgg 113
Score = 89.7 bits (45), Expect = 2e-17
Identities = 78/89 (87%)
Strand = Plus / Minus
Query: 39 aaatattacaggtatttagagactttttaagaatagatacatccatatttgagcaaattt 98
|||| ||||| |||| |||| |||||||| |||||||||||||||| ||||||||| |||
Sbjct: 93 aaatcttacatgtatctagacactttttatgaatagatacatccatttttgagcaacttt 34
Query: 99 gagacaagaatttaggatcggaggaagta 127
|||||||||||| ||| |||||| ||||
Sbjct: 33 gagacaagaattatggaacggagggagta 5
>RF00906;MIR1122;EU730899.1/99199-99323 15368:Brachypodium
distachyon
Length = 125
Score = 99.6 bits (50), Expect = 2e-20
Identities = 93/107 (86%), Gaps = 4/107 (3%)
Strand = Plus / Minus
Query: 146 tccgttccataattcttgtctcaaatttgtctaaaagtggatgtacgtatcttttcctaa 205
||||||||||||||||||||||||||||| | |||| |||||||| ||| |||||
Sbjct: 114 tccgttccataattcttgtctcaaatttgcccaaaaatggatgta----tctattccttc 59
Query: 206 agaatgtctagatacatgtaatatttcgacaagaattatggaacgga 252
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 gaggtgtctagatacatgtaatatttcgacaagaattatggaacgga 12
Score = 67.9 bits (34), Expect = 7e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 69 gaatagatacatccatatttgagcaaatttgagacaagaatt 110
|||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 63 gaatagatacatccatttttgggcaaatttgagacaagaatt 104
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 233 gacaagaattatggaacggaaagagta 259
||||||||||||||||||||| |||||
Sbjct: 95 gacaagaattatggaacggaaggagta 121
>RF00906;MIR1122;EU730898.1/54746-54622 15368:Brachypodium
distachyon
Length = 125
Score = 95.6 bits (48), Expect = 3e-19
Identities = 87/100 (87%)
Strand = Plus / Minus
Query: 11 tactccctccgattctaaattgttatcaaaatattacaggtatttagagactttttaaga 70
||||| ||||| ||| |||| || ||||||||||||| |||| |||| |||||||| |
Sbjct: 121 tactcactccgtttcataattcttgtcaaaatattacatgtatctagacactttttagaa 62
Query: 71 atagatacatccatatttgagcaaatttgagacaagaatt 110
||||||||||| || |||||||||||||||||||||||||
Sbjct: 61 atagatacatctatttttgagcaaatttgagacaagaatt 22
Score = 85.7 bits (43), Expect = 3e-16
Identities = 92/108 (85%), Gaps = 4/108 (3%)
Strand = Plus / Plus
Query: 145 ctccgttccataattcttgtctcaaatttgtctaaaagtggatgtacgtatcttttccta 204
||||||| |||||||||||||||||||||| |||| | |||||| ||| || |||
Sbjct: 11 ctccgtttcataattcttgtctcaaatttgctcaaaaatagatgta----tctatttcta 66
Query: 205 aagaatgtctagatacatgtaatatttcgacaagaattatggaacgga 252
|| | |||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 67 aaaagtgtctagatacatgtaatattttgacaagaattatgaaacgga 114
>RF00906;MIR1122;EU730902.1/94507-94383 15368:Brachypodium
distachyon
Length = 125
Score = 93.7 bits (47), Expect = 1e-18
Identities = 93/108 (86%), Gaps = 4/108 (3%)
Strand = Plus / Plus
Query: 145 ctccgttccataattcttgtctcaaatttgtctaaaagtggatgtacgtatcttttccta 204
||||||||||||||| |||||||||||||| | |||| |||||||| ||| ||||||
Sbjct: 11 ctccgttccataatttttgtctcaaatttgcccaaaaatggatgta----tctattccta 66
Query: 205 aagaatgtctagatacatgtaatatttcgacaagaattatggaacgga 252
|| || |||||||||| ||||||||||||||||||||||||||||
Sbjct: 67 aaaggcgtttagatacatgcaatatttcgacaagaattatggaacgga 114
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 63 ttttaagaatagatacatccatatttgagcaaatttgagacaagaatttaggatcggagg 122
||||| |||||||||||||||| |||| ||||||||||||||| |||| ||| ||||||
Sbjct: 69 ttttaggaatagatacatccatttttgggcaaatttgagacaaaaattatggaacggagg 10
Query: 123 aagta 127
||||
Sbjct: 9 gagta 5
>RF00906;MIR1122;EF059989.1/222260-222384 29664:Brachypodium
sylvaticum
Length = 125
Score = 85.7 bits (43), Expect = 3e-16
Identities = 92/108 (85%), Gaps = 4/108 (3%)
Strand = Plus / Plus
Query: 145 ctccgttccataattcttgtctcaaatttgtctaaaagtggatgtacgtatcttttccta 204
||||||| ||||||||||| ||| |||||||| |||| |||||||| ||| || ||
Sbjct: 11 ctccgtttcataattcttggctcgaatttgtccaaaaatggatgtatatat----tcata 66
Query: 205 aagaatgtctagatacatgtaatatttcgacaagaattatggaacgga 252
|| || |||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 67 aaaaacgtctagatacatgtaagatttcgacaagaattatgaaacgga 114
Score = 48.1 bits (24), Expect = 6e-05
Identities = 81/100 (81%)
Strand = Plus / Minus
Query: 11 tactccctccgattctaaattgttatcaaaatattacaggtatttagagactttttaaga 70
||||||||||| ||| |||| || || |||| ||||| |||| |||| |||||| ||
Sbjct: 121 tactccctccgtttcataattcttgtcgaaatcttacatgtatctagacgttttttatga 62
Query: 71 atagatacatccatatttgagcaaatttgagacaagaatt 110
||| |||||||||| |||| |||||| ||| ||||||||
Sbjct: 61 atatatacatccatttttggacaaattcgagccaagaatt 22
>RF00906;MIR1122;EU730902.1/55282-55158 15368:Brachypodium
distachyon
Length = 125
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 39 aaatattacaggtatttagagactttttaagaatagatacatccatatttgagcaaattt 98
|||||||||| |||| |||| | ||||| ||||||||||||||| |||||||||||||
Sbjct: 93 aaatattacatgtatctagacgcattttagaaatagatacatccatctttgagcaaattt 34
Query: 99 gagacaagaatt 110
||||||||||||
Sbjct: 33 gagacaagaatt 22
Score = 73.8 bits (37), Expect = 1e-12
Identities = 100/119 (84%), Gaps = 4/119 (3%)
Strand = Plus / Plus
Query: 144 tctccgttccataattcttgtctcaaatttgtctaaaagtggatgtacgtatcttttcct 203
|||||||| |||||||||||||||||||||| || |||| ||| | |||||| || ||
Sbjct: 10 tctccgtttcataattcttgtctcaaatttg-ctcaaag---atggatgtatctatttct 65
Query: 204 aaagaatgtctagatacatgtaatatttcgacaagaattatggaacggaaagagtaata 262
||| |||||||||||||||||||||||||| |||||| | |||||| ||||||||
Sbjct: 66 aaaatgcgtctagatacatgtaatatttcgacatgaattacgaaacggagggagtaata 124
>RF00906;MIR1122;EU730896.1/41625-41750 15368:Brachypodium
distachyon
Length = 126
Score = 79.8 bits (40), Expect = 2e-14
Identities = 93/109 (85%), Gaps = 5/109 (4%)
Strand = Plus / Plus
Query: 145 ctccgttccataattcttgtctcaaatttg-tctaaaagtggatgtacgtatcttttcct 203
|||||||||||||||||||||||||||||| | |||| |||||||| ||| |||
Sbjct: 11 ctccgttccataattcttgtctcaaatttgataaaaaaatggatgtatttat----tccg 66
Query: 204 aaagaatgtctagatacatgtaatatttcgacaagaattatggaacgga 252
||| | |||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 67 aaaaagtgtctagatatatgtaatattgagacaagaattatggaacgga 115
Score = 50.1 bits (25), Expect = 2e-05
Identities = 86/105 (81%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 7 acagtactccctccgattctaaattgttatcaaaatattacaggtatttagagacttttt 66
||||||||||||||| | | |||| || || ||||||||| ||| |||| |||||||
Sbjct: 126 acagtactccctccgttccataattcttgtctcaatattacatatatctagacacttttt 67
Query: 67 aagaatagatacatccatatttg-agcaaatttgagacaagaatt 110
||||| |||||||||| ||| | |||||||||||||||||||
Sbjct: 66 cggaataaatacatccatttttttatcaaatttgagacaagaatt 22
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 145 ctccgttccataattcttgtctcaa 169
|||||||||||||||||||||||||
Sbjct: 116 ctccgttccataattcttgtctcaa 92
>RF00906;MIR1122;EU730895.1/43836-43713 15368:Brachypodium
distachyon
Length = 124
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 39 aaatattacaggtatttagagactttttaagaatagatacatccatatttgagcaaattt 98
|||||||||| |||| |||| ||||||| | ||||||||||||||||||| ||||||||
Sbjct: 92 aaatattacatgtatctagatgctttttaggtatagatacatccatatttgggcaaattt 33
Query: 99 gagaca 104
||||||
Sbjct: 32 gagaca 27
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 212 tctagatacatgtaatatttcgaca 236
|||||||||||||||||||||||||
Sbjct: 73 tctagatacatgtaatatttcgaca 97
>RF00906;MIR1122;EF059989.1/54267-54145 29664:Brachypodium
sylvaticum
Length = 123
Score = 71.9 bits (36), Expect = 4e-12
Identities = 91/108 (84%), Gaps = 6/108 (5%)
Strand = Plus / Plus
Query: 145 ctccgttccataattcttgtctcaaatttgtctaaaagtggatgtacgtatcttttccta 204
||||||| ||||||||||||||||||||| | |||| |||||||| ||| || |
Sbjct: 11 ctccgtttcataattcttgtctcaaattt--ccaaaaatggatgtatctatttta----a 64
Query: 205 aagaatgtctagatacatgtaatatttcgacaagaattatggaacgga 252
|| ||| |||||||||||||||||||||||| |||||||||| |||||
Sbjct: 65 aaaaatatctagatacatgtaatatttcgacgagaattatgggacgga 112
Score = 58.0 bits (29), Expect = 7e-08
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 39 aaatattacaggtatttagagactttttaagaatagatacatccatatttgagcaaattt 98
|||||||||| |||| |||| | ||||| | ||||||||||||||| ||| | ||||||
Sbjct: 91 aaatattacatgtatctagatatttttttaaaatagatacatccattttt--ggaaattt 34
Query: 99 gagacaagaatt 110
||||||||||||
Sbjct: 33 gagacaagaatt 22
>RF00906;MIR1122;EU730898.1/63863-63739 15368:Brachypodium
distachyon
Length = 125
Score = 71.9 bits (36), Expect = 4e-12
Identities = 92/109 (84%), Gaps = 5/109 (4%)
Strand = Plus / Minus
Query: 145 ctccgttccataattctt-gtctcaaatttgtctaaaagtggatgtacgtatcttttcct 203
||||||||||||||| || |||||||||||| | |||| || ||||| ||| || ||
Sbjct: 116 ctccgttccataattttttgtctcaaatttgcccaaaattgaatgta----tctattact 61
Query: 204 aaagaatgtctagatacatgtaatatttcgacaagaattatggaacgga 252
||| | ||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 60 aaaaagcgtctagatacacgtaatgtttcgacaagaattatggaacgga 12
>RF00906;MIR1122;EU730901.1/161594-161470 15368:Brachypodium
distachyon
Length = 125
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 39 aaatattacaggtatttagagactttttaagaatagatacatccatatttgagcaaattt 98
|||||||||| |||| |||| ||||||| | |||||||||||||||| || ||||||||
Sbjct: 93 aaatattacatgtatctagacgctttttaggcatagatacatccatatctgggcaaattt 34
Query: 99 gagacaa 105
|||||||
Sbjct: 33 gagacaa 27
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 211 gtctagatacatgtaatatttcgacaa 237
|||||||||||||||||||||||||||
Sbjct: 73 gtctagatacatgtaatatttcgacaa 99
>RF00906;MIR1122;EU730900.1/18513-18389 15368:Brachypodium
distachyon
Length = 125
Score = 67.9 bits (34), Expect = 7e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 36 tcaaaatattacaggtatttagagactttttaagaatagatacatccatatttgagcaaa 95
||||||||||||| |||| || | ||||||| | ||||||||||||||||||| | |||
Sbjct: 30 tcaaaatattacatgtatctaaacgctttttaggcatagatacatccatatttgggaaaa 89
Query: 96 tttgagacaa 105
||||||||||
Sbjct: 90 tttgagacaa 99
>RF00906;MIR1122;EU730895.1/40339-40463 15368:Brachypodium
distachyon
Length = 125
Score = 65.9 bits (33), Expect = 3e-10
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 39 aaatattacaggtatttagagactttttaagaatagatacatccatatttgagcaaattt 98
|||||||||| ||| ||| ||||||||| |||||||||| ||||||||| |||||||
Sbjct: 33 aaatattacatttatctagtcactttttaaacatagatacattcatatttgatcaaattt 92
Query: 99 gagacaagaatttaggatcggaggaagta 127
|||||||| | | |||||||||| ||||
Sbjct: 93 gagacaagtaatatggatcggagggagta 121
>RF00906;MIR1122;FJ234838.1/106075-106199 29664:Brachypodium
sylvaticum
Length = 125
Score = 63.9 bits (32), Expect = 1e-09
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 42 tattacaggtatttagagactttttaagaatagatacatccatatttgagcaaatttgag 101
||||||| |||| |||| ||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 90 tattacatgtatctagacgctttttaagcatagatacatccatatttggacaaatttgag 31
>RF00906;MIR1122;EU730894.1/127135-127259 15368:Brachypodium
distachyon
Length = 125
Score = 58.0 bits (29), Expect = 7e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 210 tgtctagatacatgtaatatttcgacaag 238
|||||||||||||||||||||||||||||
Sbjct: 54 tgtctagatacatgtaatatttcgacaag 26
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 39 aaatattacaggtatttagagactttttaagaatagatacatccatatttgagcaaattt 98
|||||||||| |||| |||| |||||||| ||||||||| | |||||| ||||||||
Sbjct: 33 aaatattacatgtatctagacactttttacacgtagatacattcgtatttgggcaaattt 92
Query: 99 gagacaag 106
||||||||
Sbjct: 93 gagacaag 100
>RF00906;MIR1122;EF059989.1/156495-156619 29664:Brachypodium
sylvaticum
Length = 125
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 211 gtctagatacatgtaatatttcgacaag 238
||||||||||||||||||||||||||||
Sbjct: 53 gtctagatacatgtaatatttcgacaag 26
Score = 48.1 bits (24), Expect = 6e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 39 aaatattacaggtatttagagactttttaagaatagatacatccatatttgagcaaattt 98
|||||||||| |||| |||| ||||||| |||||||||| | |||||| |||||||
Sbjct: 33 aaatattacatgtatctagactctttttacacatagatacattcgtatttggacaaattt 92
Query: 99 gagacaag 106
||||||||
Sbjct: 93 gagacaag 100
>RF00906;MIR1122;EF059989.1/67137-67261 29664:Brachypodium
sylvaticum
Length = 125
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 39 aaatattacaggtatttagagactttttaagaatagatacatccatatttgagcaaattt 98
|||||||||| |||| || | ||||||| | ||| ||||||||||||||| |||| |||
Sbjct: 93 aaatattacatgtatctaaacgctttttacgcatatatacatccatatttgggcaatttt 34
Query: 99 gagacaag 106
||||||||
Sbjct: 33 gagacaag 26
>RF00906;MIR1122;EF059989.1/56206-56082 29664:Brachypodium
sylvaticum
Length = 125
Score = 56.0 bits (28), Expect = 3e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 42 tattacaggtatttagagactttttaagaatagatacatccatatttgagcaaatttgag 101
||||||| |||| |||| |||||||| ||||||||||||||||||| ||||||||||
Sbjct: 36 tattacatgtatctagacactttttagacatagatacatccatatttggacaaatttgag 95
>RF00906;MIR1122;EF059989.1/52700-52824 29664:Brachypodium
sylvaticum
Length = 125
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 211 gtctagatacatgtaatatttcgacaag 238
||||||||||||||||||||||||||||
Sbjct: 53 gtctagatacatgtaatatttcgacaag 26
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 39 aaatattacaggtatttagagactttttaagaatagatacatccatatttgagcaaattt 98
|||||||||| |||| |||| |||||||| |||||| ||| | |||||| ||||||||
Sbjct: 33 aaatattacatgtatctagacgctttttaaacatagatgcattcgtatttgggcaaattt 92
Query: 99 gagacaag 106
||||||||
Sbjct: 93 gagacaag 100
>RF00906;MIR1122;EU730894.1/121201-121325 15368:Brachypodium
distachyon
Length = 125
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 212 tctagatacatgtaatatttcgacaag 238
|||||||||||||||||||||||||||
Sbjct: 74 tctagatacatgtaatatttcgacaag 100
>RF00906;MIR1122;EF059989.1/223398-223521 29664:Brachypodium
sylvaticum
Length = 124
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 211 gtctagatacatgtaatatttcgacaagaattatggaacgga 252
|||| |||||||||||||||||||||| | |||||||||||
Sbjct: 72 gtctggatacatgtaatatttcgacaattaatatggaacgga 113
>RF00906;MIR1122;EF059989.1/352416-352302 29664:Brachypodium
sylvaticum
Length = 115
Score = 52.0 bits (26), Expect = 4e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 36 tcaaaatattacaggtatttagagactttttaagaatagatacatccatatttg 89
||||||||||||| |||| |||| |||||| | |||||||||||||||||||
Sbjct: 86 tcaaaatattacatgtatctagacgttttttatgcatagatacatccatatttg 33
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 211 gtctagatacatgtaatatttcgacaa 237
||||||||||||||||||||| |||||
Sbjct: 63 gtctagatacatgtaatattttgacaa 89
>RF00906;MIR1122;EF540321.1/52965-52831 4571:Triticum turgidum
Length = 135
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 145 ctccgttccataattcttgtctcaaatttgtctaaa 180
|||||| ||| ||||||||||| |||||||||||||
Sbjct: 125 ctccgtcccaaaattcttgtcttaaatttgtctaaa 90
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 48.1 bits (24), Expect = 6e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 72 tagatacatccatatttgagcaaatttgagacaagaatttaggatcggaggaagta 127
||||||||||| ||| | |||||| | |||||||||||| ||| |||||||||||
Sbjct: 76 tagatacatccgtatctaggcaaatctaagacaagaattttggaacggaggaagta 131
>RF00906;MIR1122;EF059989.1/365637-365513 29664:Brachypodium
sylvaticum
Length = 125
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 62 tttttaagaatagatacatccatatttgagcaaatttgag 101
|||||| | |||||||||||||||||||| |||||||||
Sbjct: 70 tttttaggcatagatacatccatatttgattaaatttgag 31
>RF00906;MIR1122;EU730901.1/65072-65195 15368:Brachypodium
distachyon
Length = 124
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 211 gtctagatacatgtaatatttcgacaag 238
|||||||||||| |||||||||||||||
Sbjct: 53 gtctagatacatataatatttcgacaag 26
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 71 atagatacatccatatttgagcaaatttgagacaag 106
|||||||||||| ||||| ||||||||||||||||
Sbjct: 64 atagatacatccgcatttgggcaaatttgagacaag 99
>RF00906;MIR1122;EU730900.1/55128-55253 15368:Brachypodium
distachyon
Length = 126
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 211 gtctagatacatgtaatatttcga 234
||||||||||||||||||||||||
Sbjct: 53 gtctagatacatgtaatatttcga 30
>RF00906;MIR1122;EU730902.1/79802-79895 15368:Brachypodium
distachyon
Length = 94
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 101 gacaagaatttaggatcggaggaagtac 128
|||||||||||||||||||||| |||||
Sbjct: 31 gacaagaatttaggatcggagggagtac 4
>RF00906;MIR1122;EU730895.1/40632-40541 15368:Brachypodium
distachyon
Length = 92
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 102 acaagaatttaggatcggaggaagtac 128
||||||||||||||||||||| |||||
Sbjct: 30 acaagaatttaggatcggagggagtac 4
>RF00906;MIR1122;EF059989.1/159537-159414 29664:Brachypodium
sylvaticum
Length = 124
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 211 gtctagatacatgtaatatttcg 233
|||||||||||||||||||||||
Sbjct: 72 gtctagatacatgtaatatttcg 94
