miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU730895.1/43836-43713 15368:Brachypodium
           distachyon
          Length = 124

 Score =  129 bits (65), Expect = 1e-29
 Identities = 89/97 (91%)
 Strand = Plus / Minus

                                                                       
Query: 13  tactccctccgtcccatattaagtgacgaaatactacatgtatctagacgttttttgggt 72
           ||||||||||||||||||||||||| ||||||| |||||||||||||| | ||||| |||
Sbjct: 120 tactccctccgtcccatattaagtgtcgaaatattacatgtatctagatgctttttaggt 61

                                                
Query: 73  atagatacatccatatttggacaaattcgagtcactt 109
           |||||||||||||||||||| |||||| ||| |||||
Sbjct: 60  atagatacatccatatttgggcaaatttgagacactt 24




>RF00906;MIR1122;FJ234838.1/106075-106199 29664:Brachypodium
           sylvaticum
          Length = 125

 Score =  105 bits (53), Expect = 2e-22
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                       
Query: 13  tactccctccgtcccatattaagtgacgaaatactacatgtatctagacgttttttgggt 72
           |||||||||||||||||||||| ||||    || |||||||||||||||| |||||  | 
Sbjct: 121 tactccctccgtcccatattaattgactttctattacatgtatctagacgctttttaagc 62

                                                
Query: 73  atagatacatccatatttggacaaattcgagtcactt 109
           ||||||||||||||||||||||||||| |||||||||
Sbjct: 61  atagatacatccatatttggacaaatttgagtcactt 25



 Score = 60.0 bits (30), Expect = 8e-09
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 10 aaatactccctccgtcccatattaagtgac 39
          ||||||||||||||||||||||||||||||
Sbjct: 2  aaatactccctccgtcccatattaagtgac 31




>RF00906;MIR1122;EF059989.1/56206-56082 29664:Brachypodium
           sylvaticum
          Length = 125

 Score =  105 bits (53), Expect = 2e-22
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                       
Query: 9   aaaatactccctccgtcccatattaagtgacgaaatactacatgtatctagacgtttttt 68
           ||||||||||||||||||| |||||||||||    || |||||||||||||||  |||||
Sbjct: 1   aaaatactccctccgtcccgtattaagtgactttctattacatgtatctagacacttttt 60

                                                    
Query: 69  gggtatagatacatccatatttggacaaattcgagtcactt 109
            |  ||||||||||||||||||||||||||| |||||||||
Sbjct: 61  agacatagatacatccatatttggacaaatttgagtcactt 101



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 13  tactccctccgtcccatattaagtgac 39
           ||||||||||||| |||||||||||||
Sbjct: 121 tactccctccgtctcatattaagtgac 95




>RF00906;MIR1122;EU730900.1/55128-55253 15368:Brachypodium
           distachyon
          Length = 126

 Score =  103 bits (52), Expect = 6e-22
 Identities = 89/100 (89%), Gaps = 1/100 (1%)
 Strand = Plus / Plus

                                                                       
Query: 11  aatactccctccgtcccatattaagtgacgaaatactacatgtatctagacgt-tttttg 69
           ||||||||||||||||||||||||||  ||||||| ||||||||||||||||| |||| |
Sbjct: 3   aatactccctccgtcccatattaagtttcgaaatattacatgtatctagacgtattttag 62

                                                   
Query: 70  ggtatagatacatccatatttggacaaattcgagtcactt 109
             ||||||||| ||||| ||| |||||||| |||||||||
Sbjct: 63  tatatagatacgtccatttttagacaaatttgagtcactt 102



 Score = 60.0 bits (30), Expect = 8e-09
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                         
Query: 10  aaatactccctccgtcccatattaagtgac 39
           ||||||||||||||||||||||||||||||
Sbjct: 125 aaatactccctccgtcccatattaagtgac 96




>RF00906;MIR1122;EF059989.1/159537-159414 29664:Brachypodium
           sylvaticum
          Length = 124

 Score =  101 bits (51), Expect = 2e-21
 Identities = 85/95 (89%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                       
Query: 15  ctccctccgtcccatattaagtgacgaaatactacatgtatctagacgttttttgggtat 74
           ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| | |||
Sbjct: 118 ctccctccgtctcatattaagtgacgaaatattacatgtatctagacgcttttt-gatat 60

                                              
Query: 75  agatacatccatatttggacaaattcgagtcactt 109
           |||||||  ||||||||||| |||| || ||||||
Sbjct: 59  agatacaatcatatttggacgaatttgaatcactt 25



 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 13 tactccctccgtcccatattaagtga 38
          ||||||||||||| ||||||||||||
Sbjct: 5  tactccctccgtctcatattaagtga 30




>RF00906;MIR1122;EF059989.1/24895-24770 29664:Brachypodium
           sylvaticum
          Length = 126

 Score = 91.7 bits (46), Expect = 2e-18
 Identities = 89/102 (87%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                       
Query: 9   aaaatactccctccgtcccatattaagtgacgaaatactacatgtatctagacgtttt-t 67
           |||||||||||||||||||| ||||||||||    || |||||||||||||||||||| |
Sbjct: 1   aaaatactccctccgtcccaaattaagtgactttctattacatgtatctagacgttttct 60

                                                     
Query: 68  tgggtatagatacatccatatttggacaaattcgagtcactt 109
            |  ||||||||| ||||||||| |||||||| |||||||||
Sbjct: 61  agtatatagatacgtccatatttagacaaatttgagtcactt 102



 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 13  tactccctccgtcccatattaagtgac 39
           |||||||||||||||||||||||||||
Sbjct: 122 tactccctccgtcccatattaagtgac 96




>RF00906;MIR1122;EF059989.1/223398-223521 29664:Brachypodium
           sylvaticum
          Length = 124

 Score = 89.7 bits (45), Expect = 9e-18
 Identities = 82/93 (88%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 11  aatactccctccgtcccatattaagtgacgaaatactacatgtatctagacgttttttgg 70
           |||||| ||||||| ||||||||| || ||||||| |||||||||| |||| ||||| ||
Sbjct: 122 aatacttcctccgttccatattaattgtcgaaatattacatgtatccagacctttttagg 63

                                            
Query: 71  gtatagatacatccatatttggacaaattcgag 103
            |||| ||||||| |||||||||||||||||||
Sbjct: 62  -tataaatacatctatatttggacaaattcgag 31




>RF00906;MIR1122;EF059989.1/352416-352302 29664:Brachypodium
           sylvaticum
          Length = 115

 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                       
Query: 13  tactccctccgtcccatattaagtgacgaaatactacatgtatctagacgttttttgggt 72
           |||||||||||  ||||||||| || | ||||| ||||||||||||||||||||||  | 
Sbjct: 111 tactccctccgatccatattaattgtcaaaatattacatgtatctagacgttttttatgc 52

                               
Query: 73  atagatacatccatatttgg 92
           ||||||||||||||||||||
Sbjct: 51  atagatacatccatatttgg 32




>RF00906;MIR1122;EF059989.1/365637-365513 29664:Brachypodium
           sylvaticum
          Length = 125

 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                       
Query: 11  aatactccctccgtcccatattaagtgacgaaatactacatgtatctagacgttttttgg 70
           |||||||||||||||||||||||| ||||    || |||||| |||||||| |||||| |
Sbjct: 123 aatactccctccgtcccatattaaatgactttctattacatgcatctagacattttttag 64

                                                  
Query: 71  gtatagatacatccatatttggacaaattcgagtcactt 109
           | |||||||||||||||||||   ||||| |||||||||
Sbjct: 63  gcatagatacatccatatttgattaaatttgagtcactt 25



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 13 tactccctccgtcccatattaagtgac 39
          |||||||||||||| ||||||||||||
Sbjct: 5  tactccctccgtcctatattaagtgac 31




>RF00906;MIR1122;EU730901.1/161594-161470 15368:Brachypodium
           distachyon
          Length = 125

 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                       
Query: 13  tactccctccgtcccatattaagtgacgaaatactacatgtatctagacgttttttgggt 72
           |||||||||||  ||||||||  || ||||||| |||||||||||||||| ||||| || 
Sbjct: 121 tactccctccgatccatattagttgtcgaaatattacatgtatctagacgctttttaggc 62

                                      
Query: 73  atagatacatccatatttggacaaatt 99
           |||||||||||||||| ||| ||||||
Sbjct: 61  atagatacatccatatctgggcaaatt 35




>RF00906;MIR1122;EU730900.1/18513-18389 15368:Brachypodium
          distachyon
          Length = 125

 Score = 79.8 bits (40), Expect = 9e-15
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                      
Query: 13 tactccctccgtcccatattaagtgacgaaatactacatgtatctagacgttttttgggt 72
          |||||||||||  ||||||||| || | ||||| |||||||||||| ||| ||||| || 
Sbjct: 5  tactccctccgatccatattaattgtcaaaatattacatgtatctaaacgctttttaggc 64

                              
Query: 73 atagatacatccatatttgg 92
          ||||||||||||||||||||
Sbjct: 65 atagatacatccatatttgg 84




>RF00906;MIR1122;EF059989.1/74343-74464 29664:Brachypodium
           sylvaticum
          Length = 122

 Score = 73.8 bits (37), Expect = 5e-13
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                       
Query: 18  cctccgtcccatattaagtgacgaaatactacatgtatctagacgttttttgggtataga 77
           ||||||||| |||||||||| | ||| | ||||||||||||||||||||||   ||||||
Sbjct: 113 cctccgtcctatattaagtgtcaaaacattacatgtatctagacgttttttaactataga 54

                    
Query: 78  tacatccat 86
           |||||||||
Sbjct: 53  tacatccat 45




>RF00906;MIR1122;EF059989.1/222260-222384 29664:Brachypodium
           sylvaticum
          Length = 125

 Score = 73.8 bits (37), Expect = 5e-13
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 47  tacatgtatctagacgttttttgggtatagatacatccatatttggacaaattcgag 103
           ||||||||||||||||||||||  | ||| |||||||||| ||||||||||||||||
Sbjct: 87  tacatgtatctagacgttttttatgaatatatacatccatttttggacaaattcgag 31




>RF00906;MIR1122;EF059989.1/55128-55252 29664:Brachypodium
           sylvaticum
          Length = 125

 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                       
Query: 39  cgaaatactacatgtatctagacgttttttgggtatagatacatccatatttggacaaat 98
           ||||||| |||||||||||||||| |||||  | ||||||| |||||||||||| |||||
Sbjct: 31  cgaaatattacatgtatctagacgctttttaagaatagatatatccatatttgggcaaat 90

                   
Query: 99  tcgagtca 106
           | ||||||
Sbjct: 91  ttgagtca 98




>RF00906;MIR1122;EU730901.1/58586-58463 15368:Brachypodium
           distachyon
          Length = 124

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 83/98 (84%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                       
Query: 12  atactccctccgtcccatattaagtgacgaaatactacatgtatctagacgttttttggg 71
           |||||| |||||||||||||||||||||    || || ||||||||| ||||||||| | 
Sbjct: 121 atactcgctccgtcccatattaagtgacttcctatta-atgtatctaaacgttttttagc 63

                                                 
Query: 72  tatagatacatccatatttggacaaattcgagtcactt 109
            ||  |||||||||||| |||||||||| |||||||||
Sbjct: 62  catttatacatccatatctggacaaatttgagtcactt 25



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 12 atactccctccgtcccatattaagtgac 39
          |||||| |||||||||||||||||||||
Sbjct: 4  atactctctccgtcccatattaagtgac 31




>RF00906;MIR1122;EU730895.1/70118-69993 15368:Brachypodium
          distachyon
          Length = 126

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                        
Query: 13 tactccctccgtcccatattaagtgacgaaatactacatgtatcta 58
          ||||||||||||||||||||||||| ||||||| || |||||||||
Sbjct: 5  tactccctccgtcccatattaagtgccgaaatattatatgtatcta 50



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 13  tactccctccgtcccatattaagtgac 39
           |||||||||| ||||||||||||||||
Sbjct: 122 tactccctccatcccatattaagtgac 96




>RF00906;MIR1122;EU730902.1/127235-127359 15368:Brachypodium
          distachyon
          Length = 125

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                      
Query: 39 cgaaatactacatgtatctagacgttttttgggtatagatacatccatatttggacaaat 98
          ||||||| |||||||||||||||| ||||| || |||||||||||||  ||||| |||||
Sbjct: 31 cgaaatattacatgtatctagacgctttttaggaatagatacatccaattttgggcaaat 90

           
Query: 99 t 99
          |
Sbjct: 91 t 91




>RF00906;MIR1122;EF059989.1/222136-222013 29664:Brachypodium
          sylvaticum
          Length = 124

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                      
Query: 39 cgaaatactacatgtatctagacgttttttgggtatagatacatccatatttggacaaat 98
          ||||||| ||||||||||||||||  ||||  | |||||||||||||||||||| |||||
Sbjct: 31 cgaaatattacatgtatctagacgcgttttaagaatagatacatccatatttgggcaaat 90

           
Query: 99 t 99
          |
Sbjct: 91 t 91




>RF00906;MIR1122;EU730902.1/42384-42258 15368:Brachypodium
           distachyon
          Length = 127

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 70/82 (85%), Gaps = 2/82 (2%)
 Strand = Plus / Minus

                                                                       
Query: 13  tactccctccgtcccatattaagtgacgaaatactacatgtatctagac--gttttttgg 70
           |||||||||||| ||||| |   || ||||||| |||||||||||||||  ||||||| |
Sbjct: 123 tactccctccgttccataattcttgtcgaaatattacatgtatctagacgtgttttttag 64

                                 
Query: 71  gtatagatacatccatatttgg 92
           | |||||||||||||| |||||
Sbjct: 63  gaatagatacatccatttttgg 42




>RF00906;MIR1122;EU730894.1/121201-121325 15368:Brachypodium
           distachyon
          Length = 125

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 12  atactccctccgtcccatattaagtgacgaaatactacatgtatctaga 60
           |||||||||||| |||||||||  || ||||||| ||||||||||||||
Sbjct: 122 atactccctccgacccatattacttgtcgaaatattacatgtatctaga 74




>RF00906;MIR1122;EU730899.1/90906-91030 15368:Brachypodium
          distachyon
          Length = 125

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                      
Query: 40 gaaatactacatgtatctagacgttttttgggtatagatacatccatatttggacaaatt 99
          |||||| |||||||||||||||  ||||| || |||||||||| ||| ||||| ||||||
Sbjct: 32 gaaatattacatgtatctagacactttttaggaatagatacattcatttttggtcaaatt 91




>RF00906;MIR1122;EF059989.1/67137-67261 29664:Brachypodium
          sylvaticum
          Length = 125

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                
Query: 39 cgaaatactacatgtatctagacgttttttgggtatagatacatccatatttgg 92
          ||||||| |||||||||||| ||| |||||  | ||| ||||||||||||||||
Sbjct: 95 cgaaatattacatgtatctaaacgctttttacgcatatatacatccatatttgg 42




>RF00906;MIR1122;EU730902.1/55282-55158 15368:Brachypodium
          distachyon
          Length = 125

 Score = 50.1 bits (25), Expect = 8e-06
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                               
Query: 39 cgaaatactacatgtatctagacgttttttgggtatagatacatccatatttg 91
          ||||||| ||||||||||||||||  |||| |  |||||||||||||| ||||
Sbjct: 95 cgaaatattacatgtatctagacgcattttagaaatagatacatccatctttg 43




>RF00906;MIR1122;EF059989.1/54267-54145 29664:Brachypodium
           sylvaticum
          Length = 123

 Score = 50.1 bits (25), Expect = 8e-06
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                       
Query: 13  tactccctccgtcccatattaagtgacgaaatactacatgtatctagacgttttttgggt 72
           |||||||||||||||||| |    | ||||||| ||||||||||||||  ||||||    
Sbjct: 119 tactccctccgtcccataattctcgtcgaaatattacatgtatctagatatttttttaaa 60

                                
Query: 73  atagatacatccatatttgga 93
           |||||||||||||| ||||||
Sbjct: 59  atagatacatccatttttgga 39




>RF00906;MIR1122;EF059989.1/156495-156619 29664:Brachypodium
          sylvaticum
          Length = 125

 Score = 50.1 bits (25), Expect = 8e-06
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                      
Query: 39 cgaaatactacatgtatctagacgttttttgggtatagatacatccatatttggacaaat 98
          ||||||| |||||||||||||||  |||||    |||||||||| | |||||||||||||
Sbjct: 31 cgaaatattacatgtatctagactctttttacacatagatacattcgtatttggacaaat 90

           
Query: 99 t 99
          |
Sbjct: 91 t 91




>RF00906;MIR1122;EU730902.1/94507-94383 15368:Brachypodium
          distachyon
          Length = 125

 Score = 50.1 bits (25), Expect = 8e-06
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                      
Query: 39 cgaaatactacatgtatctagacgttttttgggtatagatacatccatatttggacaaat 98
          ||||||| | |||||||||| |||  |||| || |||||||||||||| ||||| |||||
Sbjct: 95 cgaaatattgcatgtatctaaacgccttttaggaatagatacatccatttttgggcaaat 36

           
Query: 99 t 99
          |
Sbjct: 35 t 35




>RF00906;MIR1122;AB239678.1/2131-2247 52163:Triticum monococcum
          subsp. aegilopoides
          Length = 117

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 13 tactccctccgtcccatattaagtgac 39
          |||||||||||||||| ||||||||||
Sbjct: 5  tactccctccgtcccaaattaagtgac 31



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 13  tactccctccgtcccatattaagtgac 39
           |||||||||||||||| ||||||||||
Sbjct: 113 tactccctccgtcccaaattaagtgac 87




>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
          Length = 94

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 13 tactccctccgtcccatattaagtgac 39
          |||||||||||||||| ||||||||||
Sbjct: 90 tactccctccgtcccaaattaagtgac 64




>RF00906;MIR1122;EU730895.1/40339-40463 15368:Brachypodium
          distachyon
          Length = 125

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                         
Query: 13 tactccctccgtcccatattaagtgacgaaatactacatgtatctag 59
          ||||||||||| |||||||||  || ||||||| ||||| |||||||
Sbjct: 5  tactccctccgacccatattacttgtcgaaatattacatttatctag 51




>RF00906;MIR1122;EU730898.1/63863-63739 15368:Brachypodium
          distachyon
          Length = 125

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 74/91 (81%)
 Strand = Plus / Plus

                                                                      
Query: 9  aaaatactccctccgtcccatattaagtgacgaaatactacatgtatctagacgtttttt 68
          |||||||||||||||| ||||| |   || ||||| | ||| |||||||||||| |||||
Sbjct: 1  aaaatactccctccgttccataattcttgtcgaaacattacgtgtatctagacgcttttt 60

                                         
Query: 69 gggtatagatacatccatatttggacaaatt 99
           |  |||||||||| ||  ||||| ||||||
Sbjct: 61 agtaatagatacattcaattttgggcaaatt 91




>RF00906;MIR1122;AAAA02020195.1/3874-3739 39946:Oryza sativa
          Indica Group
          Length = 136

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 aatactccctccgtcccatatta 33
          |||||||||||||||||||||||
Sbjct: 3  aatactccctccgtcccatatta 25




>RF00906;MIR1122;AACV01014515.1/3255-3390 39947:Oryza sativa
          Japonica Group
          Length = 136

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 aatactccctccgtcccatatta 33
          |||||||||||||||||||||||
Sbjct: 3  aatactccctccgtcccatatta 25




>RF01058;MIR806;AAAA02017693.1/1498-1741 39946:Oryza sativa Indica
          Group
          Length = 244

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 12 atactccctccgtcccatattaagtg 37
          |||||||||||||||||| |||||||
Sbjct: 1  atactccctccgtcccattttaagtg 26




>RF01058;MIR806;AP004661.3/132951-132713 39947:Oryza sativa
          Japonica Group
          Length = 239

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 12 atactccctccgtcccatattaagtg 37
          |||||||||||||||||| |||||||
Sbjct: 1  atactccctccgtcccatcttaagtg 26



 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 12  atactccctccgtcccatattaagtg 37
           |||||||||||||||||| |||||||
Sbjct: 239 atactccctccgtcccattttaagtg 214




>RF01058;MIR806;AACV01003457.1/7153-7393 39947:Oryza sativa Japonica
           Group
          Length = 241

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 12  atactccctccgtcccatattaagtg 37
           |||||||||||||||||| |||||||
Sbjct: 241 atactccctccgtcccattttaagtg 216




>RF00906;MIR1122;EF059989.1/52700-52824 29664:Brachypodium
          sylvaticum
          Length = 125

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 39 cgaaatactacatgtatctagacgtttttt 68
          ||||||| |||||||||||||||| |||||
Sbjct: 31 cgaaatattacatgtatctagacgcttttt 60




>RF00906;MIR1122;AAAA02030950.1/26939-26775 39946:Oryza sativa
          Indica Group
          Length = 165

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  aaaatactccctccgtcccata 30
          ||||||||||||||||||||||
Sbjct: 1  aaaatactccctccgtcccata 22




>RF00906;MIR1122;AAAA02017235.1/6832-6953 39946:Oryza sativa Indica
           Group
          Length = 122

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 12  atactccctccgtcccatatta 33
           ||||||||||||||||||||||
Sbjct: 119 atactccctccgtcccatatta 98




>RF00906;MIR1122;AC123518.2/65954-65790 39947:Oryza sativa Japonica
           Group
          Length = 165

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 9   aaaatactccctccgtcccata 30
           ||||||||||||||||||||||
Sbjct: 165 aaaatactccctccgtcccata 144