miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU730902.1/127235-127359 15368:Brachypodium
distachyon
Length = 125
Score = 151 bits (76), Expect = 4e-36
Identities = 85/88 (96%)
Strand = Plus / Plus
Query: 49 gtcgaaatattacatgtatctagacgcttttcaggaatagatacatccattttggggcaa 108
||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||
Sbjct: 29 gtcgaaatattacatgtatctagacgctttttaggaatagatacatccaattttgggcaa 88
Query: 109 atttgagacaagaattatggaacggagg 136
||||||||||||||||||||||||||||
Sbjct: 89 atttgagacaagaattatggaacggagg 116
>RF00906;MIR1122;EU730902.1/42384-42258 15368:Brachypodium
distachyon
Length = 127
Score = 135 bits (68), Expect = 2e-31
Identities = 104/115 (90%), Gaps = 2/115 (1%)
Strand = Plus / Minus
Query: 24 gtactccctccgtcccataattaccgtcgaaatattacatgtatctagacgc--ttttca 81
||||||||||||| |||||||| |||||||||||||||||||||||||| |||| |
Sbjct: 124 gtactccctccgttccataattcttgtcgaaatattacatgtatctagacgtgtttttta 65
Query: 82 ggaatagatacatccattttggggcaaatttgagacaagaattatggaacggagg 136
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 64 ggaatagatacatccatttttgggttaatttgagacaagaattatggaacggagg 10
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 gacaagaattatggaacggagg 136
||||||||||||||||||||||
Sbjct: 97 gacaagaattatggaacggagg 118
>RF00906;MIR1122;EU730899.1/99199-99323 15368:Brachypodium
distachyon
Length = 125
Score = 133 bits (67), Expect = 8e-31
Identities = 100/111 (90%)
Strand = Plus / Plus
Query: 24 gtactccctccgtcccataattaccgtcgaaatattacatgtatctagacgcttttcagg 83
||||| ||||||| |||||||| ||||||||||||||||||||||||| | | |||
Sbjct: 4 gtacttcctccgttccataattcttgtcgaaatattacatgtatctagacacctcgaagg 63
Query: 84 aatagatacatccattttggggcaaatttgagacaagaattatggaacgga 134
|||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 64 aatagatacatccatttttgggcaaatttgagacaagaattatggaacgga 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 115 gacaagaattatggaacggagga 137
|||||||||||||||||||||||
Sbjct: 31 gacaagaattatggaacggagga 9
>RF00906;MIR1122;EU730899.1/90906-91030 15368:Brachypodium
distachyon
Length = 125
Score = 131 bits (66), Expect = 3e-30
Identities = 102/114 (89%)
Strand = Plus / Plus
Query: 23 tgtactccctccgtcccataattaccgtcgaaatattacatgtatctagacgcttttcag 82
|||||||||||||| ||||||| || |||||||||||||||||||||| ||||| ||
Sbjct: 3 tgtactccctccgtttcataattcttgttgaaatattacatgtatctagacactttttag 62
Query: 83 gaatagatacatccattttggggcaaatttgagacaagaattatggaacggagg 136
|||||||||||| |||||| || ||||||||||||||||||||| |||||||||
Sbjct: 63 gaatagatacattcatttttggtcaaatttgagacaagaattatcgaacggagg 116
>RF00906;MIR1122;EU730902.1/94507-94383 15368:Brachypodium
distachyon
Length = 125
Score = 131 bits (66), Expect = 3e-30
Identities = 96/106 (90%)
Strand = Plus / Minus
Query: 31 ctccgtcccataattaccgtcgaaatattacatgtatctagacgcttttcaggaatagat 90
|||||| |||||||| ||||||||||| |||||||||| |||| ||| ||||||||||
Sbjct: 115 ctccgttccataattcttgtcgaaatattgcatgtatctaaacgccttttaggaatagat 56
Query: 91 acatccattttggggcaaatttgagacaagaattatggaacggagg 136
||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 55 acatccatttttgggcaaatttgagacaaaaattatggaacggagg 10
>RF00906;MIR1122;EU730901.1/108914-109038 15368:Brachypodium
distachyon
Length = 125
Score = 127 bits (64), Expect = 5e-29
Identities = 100/112 (89%)
Strand = Plus / Minus
Query: 25 tactccctccgtcccataattaccgtcgaaatattacatgtatctagacgcttttcagga 84
||||||| |||| |||||||| |||||||| |||||||||||||||| ||||| | ||
Sbjct: 121 tactcccgccgttccataattcttgtcgaaatcttacatgtatctagacactttttatga 62
Query: 85 atagatacatccattttggggcaaatttgagacaagaattatggaacggagg 136
||||||||||||||||| | |||| |||||||||||||||||||||||||||
Sbjct: 61 atagatacatccatttttgagcaactttgagacaagaattatggaacggagg 10
>RF00906;MIR1122;EU730895.1/43836-43713 15368:Brachypodium
distachyon
Length = 124
Score = 121 bits (61), Expect = 3e-27
Identities = 88/97 (90%)
Strand = Plus / Minus
Query: 22 atgtactccctccgtcccataattaccgtcgaaatattacatgtatctagacgcttttca 81
||||||||||||||||||||| | | |||||||||||||||||||||||| |||||| |
Sbjct: 123 atgtactccctccgtcccatattaagtgtcgaaatattacatgtatctagatgcttttta 64
Query: 82 ggaatagatacatccattttggggcaaatttgagaca 118
|| |||||||||||||| || ||||||||||||||||
Sbjct: 63 ggtatagatacatccatatttgggcaaatttgagaca 27
>RF00906;MIR1122;EU730898.1/63863-63739 15368:Brachypodium
distachyon
Length = 125
Score = 121 bits (61), Expect = 3e-27
Identities = 104/117 (88%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 25 tactccctccgtcccataattaccgtcgaaatattacatgtatctagacgcttttcagga 84
|||||||||||| |||||||| ||||||| ||||| ||||||||||||||||| || |
Sbjct: 5 tactccctccgttccataattcttgtcgaaacattacgtgtatctagacgctttttagta 64
Query: 85 atagatacatccattttggggcaaatttgagac-aagaattatggaacggaggagta 140
|||||||||| || ||| ||||||||||||||| || ||||||||||||||||||||
Sbjct: 65 atagatacattcaattttgggcaaatttgagacaaaaaattatggaacggaggagta 121
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 115 gacaagaattatggaacggagg 136
||||||||||||||||||||||
Sbjct: 31 gacaagaattatggaacggagg 10
>RF00906;MIR1122;EU730902.1/55282-55158 15368:Brachypodium
distachyon
Length = 125
Score = 117 bits (59), Expect = 5e-26
Identities = 80/87 (91%)
Strand = Plus / Minus
Query: 49 gtcgaaatattacatgtatctagacgcttttcaggaatagatacatccattttggggcaa 108
||||||||||||||||||||||||||| ||| || ||||||||||||||| || | ||||
Sbjct: 97 gtcgaaatattacatgtatctagacgcattttagaaatagatacatccatctttgagcaa 38
Query: 109 atttgagacaagaattatggaacggag 135
||||||||||||||||||| |||||||
Sbjct: 37 atttgagacaagaattatgaaacggag 11
>RF00906;MIR1122;EF059989.1/54267-54145 29664:Brachypodium
sylvaticum
Length = 123
Score = 117 bits (59), Expect = 5e-26
Identities = 101/114 (88%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 23 tgtactccctccgtcccataattaccgtcgaaatattacatgtatctagacgcttttcag 82
||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 121 tgtactccctccgtcccataattctcgtcgaaatattacatgtatctagatattttttta 62
Query: 83 gaatagatacatccattttggggcaaatttgagacaagaattatggaacggagg 136
|||||||||||||||||| || ||||||||||||||||||||| ||||||||
Sbjct: 61 aaatagatacatccatttttgg--aaatttgagacaagaattatgaaacggagg 10
>RF00906;MIR1122;EF059989.1/222136-222013 29664:Brachypodium
sylvaticum
Length = 124
Score = 113 bits (57), Expect = 8e-25
Identities = 90/101 (89%)
Strand = Plus / Plus
Query: 24 gtactccctccgtcccataattaccgtcgaaatattacatgtatctagacgcttttcagg 83
|||||||||||| || ||||| ||||||||||||||||||||||||||| ||| | |
Sbjct: 4 gtactccctccgatcctaaattattgtcgaaatattacatgtatctagacgcgttttaag 63
Query: 84 aatagatacatccattttggggcaaatttgagacaagaatt 124
||||||||||||||| || ||||||||||||||||||||||
Sbjct: 64 aatagatacatccatatttgggcaaatttgagacaagaatt 104
>RF00906;MIR1122;EU730898.1/54746-54622 15368:Brachypodium
distachyon
Length = 125
Score = 111 bits (56), Expect = 3e-24
Identities = 77/84 (91%)
Strand = Plus / Minus
Query: 53 aaatattacatgtatctagacgcttttcaggaatagatacatccattttggggcaaattt 112
||||||||||||||||||||| ||||| || |||||||||||| ||||| | ||||||||
Sbjct: 93 aaatattacatgtatctagacactttttagaaatagatacatctatttttgagcaaattt 34
Query: 113 gagacaagaattatggaacggagg 136
||||||||||||||| ||||||||
Sbjct: 33 gagacaagaattatgaaacggagg 10
>RF00906;MIR1122;EF059989.1/55128-55252 29664:Brachypodium
sylvaticum
Length = 125
Score = 103 bits (52), Expect = 7e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 49 gtcgaaatattacatgtatctagacgcttttcaggaatagatacatccattttggggcaa 108
||||||||||||||||||||||||||||||| | ||||||||| |||||| || ||||||
Sbjct: 29 gtcgaaatattacatgtatctagacgctttttaagaatagatatatccatatttgggcaa 88
Query: 109 atttgagacaagaatt 124
||||||| ||||||||
Sbjct: 89 atttgagtcaagaatt 104
>RF00906;MIR1122;EF059989.1/222260-222384 29664:Brachypodium
sylvaticum
Length = 125
Score = 103 bits (52), Expect = 7e-22
Identities = 97/112 (86%)
Strand = Plus / Minus
Query: 25 tactccctccgtcccataattaccgtcgaaatattacatgtatctagacgcttttcagga 84
|||||||||||| ||||||| |||||||| ||||||||||||||||| |||| | ||
Sbjct: 121 tactccctccgtttcataattcttgtcgaaatcttacatgtatctagacgttttttatga 62
Query: 85 atagatacatccattttggggcaaatttgagacaagaattatggaacggagg 136
||| ||||||||||||| || |||||| ||| ||||||||||| ||||||||
Sbjct: 61 atatatacatccatttttggacaaattcgagccaagaattatgaaacggagg 10
>RF00906;MIR1122;EU730901.1/161594-161470 15368:Brachypodium
distachyon
Length = 125
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 49 gtcgaaatattacatgtatctagacgcttttcaggaatagatacatccattttggggcaa 108
||||||||||||||||||||||||||||||| ||| |||||||||||||| | ||||||
Sbjct: 97 gtcgaaatattacatgtatctagacgctttttaggcatagatacatccatatctgggcaa 38
Query: 109 atttgagacaa 119
|||||||||||
Sbjct: 37 atttgagacaa 27
>RF00906;MIR1122;EU730902.1/30283-30160 15368:Brachypodium
distachyon
Length = 124
Score = 97.6 bits (49), Expect = 5e-20
Identities = 98/113 (86%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 24 gtactccctccgtcccataattaccgtcgaaatattacatgtatctagacgcttttcagg 83
|||||||||||||| ||||||| |||||||||| | ||| ||||| |||||||| ||
Sbjct: 121 gtactccctccgtctcataattcttgtcgaaatatcagatgcatctaaacgctttttaga 62
Query: 84 aatagatacatccattttggggcaaatttgagacaagaattatggaacggagg 136
||||| |||||| ||||| ||||||||||||||||||||||||| || |||||
Sbjct: 61 aatagctacatc-atttttgggcaaatttgagacaagaattatgaaatggagg 10
>RF00906;MIR1122;EU730896.1/41625-41750 15368:Brachypodium
distachyon
Length = 126
Score = 89.7 bits (45), Expect = 1e-17
Identities = 97/113 (85%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 24 gtactccctccgtcccataattaccgtcgaaatattacatgtatctagacgcttttcagg 83
||||||||||||| |||||||| ||| |||||||||| ||||||||| ||||| ||
Sbjct: 123 gtactccctccgttccataattcttgtctcaatattacatatatctagacactttttcgg 64
Query: 84 aatagatacatccattttgggg-caaatttgagacaagaattatggaacggag 135
|||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 63 aataaatacatccatttttttatcaaatttgagacaagaattatggaacggag 11
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 111 ttgagacaagaattatggaacggagg 136
||||||||||||||||||||||||||
Sbjct: 92 ttgagacaagaattatggaacggagg 117
>RF00906;MIR1122;EU730900.1/18513-18389 15368:Brachypodium
distachyon
Length = 125
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 53 aaatattacatgtatctagacgcttttcaggaatagatacatccattttggggcaaattt 112
|||||||||||||||||| |||||||| ||| |||||||||||||| || ||| ||||||
Sbjct: 33 aaatattacatgtatctaaacgctttttaggcatagatacatccatatttgggaaaattt 92
Query: 113 gagacaa 119
|||||||
Sbjct: 93 gagacaa 99
>RF00906;MIR1122;EF059989.1/67137-67261 29664:Brachypodium
sylvaticum
Length = 125
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 50 tcgaaatattacatgtatctagacgcttttcaggaatagatacatccattttggggcaaa 109
||||||||||||||||||||| |||||||| | | ||| |||||||||| || ||||||
Sbjct: 96 tcgaaatattacatgtatctaaacgctttttacgcatatatacatccatatttgggcaat 37
Query: 110 tttgagacaag 120
|||||||||||
Sbjct: 36 tttgagacaag 26
>RF00906;MIR1122;EF059989.1/52700-52824 29664:Brachypodium
sylvaticum
Length = 125
Score = 73.8 bits (37), Expect = 7e-13
Identities = 83/97 (85%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 49 gtcgaaatattacatgtatctagacgcttttcaggaatagatacatccattttggggcaa 108
||||||||||||||||||||||||||||||| | |||||| ||| | | || ||||||
Sbjct: 29 gtcgaaatattacatgtatctagacgctttttaaacatagatgcattcgtatttgggcaa 88
Query: 109 atttgagacaagaattatggaacgga-ggagtaacat 144
|||||||||||| | ||||| |||| ||||||||||
Sbjct: 89 atttgagacaagtaatatgggtcggagggagtaacat 125
>RF00906;MIR1122;FJ234838.1/106075-106199 29664:Brachypodium
sylvaticum
Length = 125
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 56 tattacatgtatctagacgcttttcaggaatagatacatccattttggggcaaatttgag 115
|||||||||||||||||||||||| | | |||||||||||||| || || ||||||||||
Sbjct: 90 tattacatgtatctagacgctttttaagcatagatacatccatatttggacaaatttgag 31
>RF00906;MIR1122;EU730894.1/127135-127259 15368:Brachypodium
distachyon
Length = 125
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 49 gtcgaaatattacatgtatctagacgcttttcaggaatagatacatccattttggggcaa 108
||||||||||||||||||||||||| ||||| | ||||||||| | | || ||||||
Sbjct: 29 gtcgaaatattacatgtatctagacactttttacacgtagatacattcgtatttgggcaa 88
Query: 109 atttgagacaag 120
||||||||||||
Sbjct: 89 atttgagacaag 100
>RF00906;MIR1122;EF059989.1/156495-156619 29664:Brachypodium
sylvaticum
Length = 125
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 49 gtcgaaatattacatgtatctagacgcttttcaggaatagatacatccattttggggcaa 108
||||||||||||||||||||||||| ||||| | |||||||||| | | || || |||
Sbjct: 29 gtcgaaatattacatgtatctagactctttttacacatagatacattcgtatttggacaa 88
Query: 109 atttgagacaag 120
||||||||||||
Sbjct: 89 atttgagacaag 100
>RF00906;MIR1122;EU730900.1/55128-55253 15368:Brachypodium
distachyon
Length = 126
Score = 63.9 bits (32), Expect = 6e-10
Identities = 78/92 (84%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 25 tactccctccgtcccataattaccgtcgaaatattacatgtatctagacgcttttcagga 84
|||||||||||||||||| | | ||||||||||||||||||||||||| ||| || |
Sbjct: 5 tactccctccgtcccatattaagtttcgaaatattacatgtatctagacgtattttagta 64
Query: 85 -atagatacatccattttggggcaaatttgag 115
|||||||| |||||||| | ||||||||||
Sbjct: 65 tatagatacgtccatttttagacaaatttgag 96
>RF00906;MIR1122;EF059989.1/56206-56082 29664:Brachypodium
sylvaticum
Length = 125
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 56 tattacatgtatctagacgcttttcaggaatagatacatccattttggggcaaatttgag 115
|||||||||||||||||| ||||| || |||||||||||||| || || ||||||||||
Sbjct: 36 tattacatgtatctagacactttttagacatagatacatccatatttggacaaatttgag 95
>RF00906;MIR1122;EF059989.1/352416-352302 29664:Brachypodium
sylvaticum
Length = 115
Score = 61.9 bits (31), Expect = 3e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 24 gtactccctccgtcccataattaccgtcgaaatattacatgtatctagacgcttttcagg 83
|||||||||||| ||||| | | ||| |||||||||||||||||||||| |||| | |
Sbjct: 112 gtactccctccgatccatattaattgtcaaaatattacatgtatctagacgttttttatg 53
Query: 84 aatagatacatccat 98
||||||||||||||
Sbjct: 52 catagatacatccat 38
>RF00906;MIR1122;EU730895.1/40339-40463 15368:Brachypodium
distachyon
Length = 125
Score = 58.0 bits (29), Expect = 4e-08
Identities = 94/113 (83%), Gaps = 2/113 (1%)
Strand = Plus / Plus
Query: 25 tactccctccgtcccataattacc-gtcgaaatattacatgtatctagacgcttttcagg 83
||||||||||| |||||| |||| ||||||||||||||| ||||||| | ||||| |
Sbjct: 5 tactccctccgacccata-ttacttgtcgaaatattacatttatctagtcactttttaaa 63
Query: 84 aatagatacatccattttggggcaaatttgagacaagaattatggaacggagg 136
|||||||||| ||| || | ||||||||||||||| | |||||| ||||||
Sbjct: 64 catagatacattcatatttgatcaaatttgagacaagtaatatggatcggagg 116
>RF00906;MIR1122;EU730894.1/121201-121325 15368:Brachypodium
distachyon
Length = 125
Score = 58.0 bits (29), Expect = 4e-08
Identities = 82/97 (84%), Gaps = 2/97 (2%)
Strand = Plus / Minus
Query: 25 tactccctccgtcccataattacc-gtcgaaatattacatgtatctagacgcttttcagg 83
||||||||||| |||||| |||| |||||||||||||||||||||||| |||||| |
Sbjct: 121 tactccctccgacccata-ttacttgtcgaaatattacatgtatctagatgctttttaaa 63
Query: 84 aatagatacatccattttggggcaaatttgagacaag 120
|| || |||||||| | ||||||||||| ||||||
Sbjct: 62 cattgacacatccataattgggcaaatttgtgacaag 26
>RF00906;MIR1122;EF059989.1/159537-159414 29664:Brachypodium
sylvaticum
Length = 124
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 51 cgaaatattacatgtatctagacgctttt 79
|||||||||||||||||||||||||||||
Sbjct: 94 cgaaatattacatgtatctagacgctttt 66
>RF00906;MIR1122;EU730901.1/65072-65195 15368:Brachypodium
distachyon
Length = 124
Score = 56.0 bits (28), Expect = 2e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 49 gtcgaaatattacatgtatctagacgcttttcaggaatagatacatccattttggggcaa 108
|||||||||||| ||||||||||||| |||| | |||||||||||| || ||||||
Sbjct: 29 gtcgaaatattatatgtatctagacg-tttttacacatagatacatccgcatttgggcaa 87
Query: 109 atttgagacaag 120
||||||||||||
Sbjct: 88 atttgagacaag 99
>RF00906;MIR1122;EF059989.1/223398-223521 29664:Brachypodium
sylvaticum
Length = 124
Score = 54.0 bits (27), Expect = 6e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 49 gtcgaaatattacatgtatctagacgcttttcaggaatagatacatccattttggggcaa 108
|||||||||||||||||||| |||| ||||| ||| ||| ||||||| || || || |||
Sbjct: 96 gtcgaaatattacatgtatccagac-ctttttaggtataaatacatctatatttggacaa 38
Query: 109 atttgagacaa 119
||| |||||||
Sbjct: 37 attcgagacaa 27
>RF00906;MIR1122;EU730895.1/70118-69993 15368:Brachypodium
distachyon
Length = 126
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 22 atgtactccctccgtcccataattaccgtcgaaatattacatgtatcta 70
||||||||||||||||||||| | | | |||||||||| |||||||||
Sbjct: 2 atgtactccctccgtcccatattaagtgccgaaatattatatgtatcta 50
>RF00906;MIR1122;AP008215.1/10902261-10902381 39947:Oryza sativa
Japonica Group
Length = 121
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 21 aatgtactccctccgtcccataat 44
||||||||||||||||||||||||
Sbjct: 121 aatgtactccctccgtcccataat 98
>RF00906;MIR1122;AAAA02017713.1/95926-95807 39946:Oryza sativa
Indica Group
Length = 120
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 21 aatgtactccctccgtcccataat 44
||||||||||||||||||||||||
Sbjct: 120 aatgtactccctccgtcccataat 97
>RF00906;MIR1122;AJ507395.1/8084-8185 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 102
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 22 atgtactccctccgtcccataat 44
|||||||||||||||||||||||
Sbjct: 101 atgtactccctccgtcccataat 79
>RF00906;MIR1122;EF059989.1/365637-365513 29664:Brachypodium
sylvaticum
Length = 125
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 56 tattacatgtatctagacgcttttcaggaatagatacatccat 98
||||||||| |||||||| |||| ||| ||||||||||||||
Sbjct: 90 tattacatgcatctagacattttttaggcatagatacatccat 48
>RF00906;MIR1122;AAAA02003912.1/60341-60484 39946:Oryza sativa
Indica Group
Length = 144
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 atgtactccctccgtcccataat 44
|||||||||||||||||||||||
Sbjct: 2 atgtactccctccgtcccataat 24
>RF00906;MIR1122;AAAA02033572.1/45748-45869 39946:Oryza sativa
Indica Group
Length = 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 22 atgtactccctccgtcccataat 44
|||||||||||||||||||||||
Sbjct: 121 atgtactccctccgtcccataat 99
>RF00906;MIR1122;AACV01010090.1/14054-14174 39947:Oryza sativa
Japonica Group
Length = 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 atgtactccctccgtcccataat 44
|||||||||||||||||||||||
Sbjct: 2 atgtactccctccgtcccataat 24
>RF00906;MIR1122;AP008212.1/26495633-26495543 39947:Oryza sativa
Japonica Group
Length = 91
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 22 atgtactccctccgtcccataat 44
|||||||||||||||||||||||
Sbjct: 90 atgtactccctccgtcccataat 68
>RF00906;MIR1122;AL606607.3/13860-13742 39947:Oryza sativa
Japonica Group
Length = 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 atgtactccctccgtcccataat 44
|||||||||||||||||||||||
Sbjct: 2 atgtactccctccgtcccataat 24
>RF00906;MIR1122;CT009735.1/55205-55297 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 23 tgtactccctccgtcccataat 44
||||||||||||||||||||||
Sbjct: 91 tgtactccctccgtcccataat 70
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 104 ggcaaatttgagacaagaattatggaacggagga 137
||||||| | ||||||||||| ||||||||||||
Sbjct: 94 ggcaaatctaagacaagaattttggaacggagga 127
>RF00906;MIR1122;AM180263.1/1164-1082 4513:Hordeum vulgare
Length = 83
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 115 gacaagaattatggaacggagg 136
||||||||||||||||||||||
Sbjct: 31 gacaagaattatggaacggagg 10
>RF00906;MIR1122;EF059989.1/74343-74464 29664:Brachypodium
sylvaticum
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 57 attacatgtatctagacgcttttcaggaatagatacatccat 98
|||||||||||||||||| |||| | ||||||||||||||
Sbjct: 86 attacatgtatctagacgttttttaactatagatacatccat 45
>RF00906;MIR1122;AAAA02022617.1/34247-34092 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tgtactccctccgtcccataat 44
||||||||||||||||||||||
Sbjct: 3 tgtactccctccgtcccataat 24
>RF00906;MIR1122;AC133860.5/153753-153857 39947:Oryza sativa
Japonica Group
Length = 105
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 23 tgtactccctccgtcccataat 44
||||||||||||||||||||||
Sbjct: 103 tgtactccctccgtcccataat 82
>RF00906;MIR1122;AACV01005006.1/10159-10274 39947:Oryza sativa
Japonica Group
Length = 116
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 atgtactccctccgtcccataa 43
||||||||||||||||||||||
Sbjct: 2 atgtactccctccgtcccataa 23
>RF00906;MIR1122;AACV01018687.1/6312-6175 39947:Oryza sativa
Japonica Group
Length = 138
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 atgtactccctccgtcccataa 43
||||||||||||||||||||||
Sbjct: 2 atgtactccctccgtcccataa 23
>RF00906;MIR1122;AP008215.1/17611882-17611726 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 23 tgtactccctccgtcccataat 44
||||||||||||||||||||||
Sbjct: 155 tgtactccctccgtcccataat 134
>RF00906;MIR1122;AP008211.1/22648108-22648219 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tgtactccctccgtcccataat 44
||||||||||||||||||||||
Sbjct: 3 tgtactccctccgtcccataat 24
