miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU730899.1/90906-91030 15368:Brachypodium
distachyon
Length = 125
Score = 168 bits (85), Expect = 1e-41
Identities = 109/117 (93%)
Strand = Plus / Minus
Query: 14 tactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctattcc 73
|||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 121 tactccctccgttcgataattcttgtctcaaatttgaccaaaaatgaatgtatctattcc 62
Query: 74 tgaaaagtgtctagatacatgtaatatttcgacaagaattatggaacggagtgagta 130
| |||||||||||||||||||||||||||| |||||||||||| ||||||| |||||
Sbjct: 61 taaaaagtgtctagatacatgtaatatttcaacaagaattatgaaacggagggagta 5
>RF00906;MIR1122;EU730902.1/127235-127359 15368:Brachypodium
distachyon
Length = 125
Score = 159 bits (80), Expect = 1e-38
Identities = 101/108 (93%)
Strand = Plus / Minus
Query: 13 atactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctattc 72
||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 122 atactccctccgttccataattcttgtctcaaatttgcccaaaattggatgtatctattc 63
Query: 73 ctgaaaagtgtctagatacatgtaatatttcgacaagaattatggaac 120
|| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctaaaaagcgtctagatacatgtaatatttcgacaagaattatggaac 15
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 104 gacaagaattatggaacggagtgagtatat 133
||||||||||||||||||||| ||||||||
Sbjct: 95 gacaagaattatggaacggagggagtatat 124
>RF00906;MIR1122;EU730898.1/54746-54622 15368:Brachypodium
distachyon
Length = 125
Score = 151 bits (76), Expect = 3e-36
Identities = 109/120 (90%)
Strand = Plus / Plus
Query: 11 taatactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctat 70
|||||||||||||||| |||||||||| ||||||||||| |||| || ||||||||||
Sbjct: 2 taatactccctccgtttcataattcttgtctcaaatttgctcaaaaatagatgtatctat 61
Query: 71 tcctgaaaagtgtctagatacatgtaatatttcgacaagaattatggaacggagtgagta 130
| || ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 62 ttctaaaaagtgtctagatacatgtaatattttgacaagaattatgaaacggagtgagta 121
>RF00906;MIR1122;EU730899.1/99199-99323 15368:Brachypodium
distachyon
Length = 125
Score = 149 bits (75), Expect = 1e-35
Identities = 102/111 (91%)
Strand = Plus / Minus
Query: 14 tactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctattcc 73
|||||| ||||||||||||||||| ||||||||||| ||||| ||| |||||||||||||
Sbjct: 121 tactccttccgttccataattcttgtctcaaatttgcccaaaaatggatgtatctattcc 62
Query: 74 tgaaaagtgtctagatacatgtaatatttcgacaagaattatggaacggag 124
| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcgaggtgtctagatacatgtaatatttcgacaagaattatggaacggag 11
>RF00906;MIR1122;EU730902.1/94507-94383 15368:Brachypodium
distachyon
Length = 125
Score = 147 bits (74), Expect = 5e-35
Identities = 107/118 (90%)
Strand = Plus / Plus
Query: 13 atactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctattc 72
|||||||||||||||||||||| || ||||||||||| ||||| ||| ||||||||||||
Sbjct: 4 atactccctccgttccataatttttgtctcaaatttgcccaaaaatggatgtatctattc 63
Query: 73 ctgaaaagtgtctagatacatgtaatatttcgacaagaattatggaacggagtgagta 130
|| ||| | || |||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 64 ctaaaaggcgtttagatacatgcaatatttcgacaagaattatggaacggagtaagta 121
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 104 gacaagaattatggaacggagtgagtatat 133
||||| ||||||||||||||| ||||||||
Sbjct: 31 gacaaaaattatggaacggagggagtatat 2
>RF00906;MIR1122;EU730901.1/108914-109038 15368:Brachypodium
distachyon
Length = 125
Score = 145 bits (73), Expect = 2e-34
Identities = 100/109 (91%)
Strand = Plus / Plus
Query: 14 tactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctattcc 73
|||||||||||||||||||||||| ||||||| ||| |||| ||| ||||||||||||
Sbjct: 5 tactccctccgttccataattcttgtctcaaagttgctcaaaaatggatgtatctattca 64
Query: 74 tgaaaagtgtctagatacatgtaatatttcgacaagaattatggaacgg 122
| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 65 taaaaagtgtctagatacatgtaagatttcgacaagaattatggaacgg 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 104 gacaagaattatggaacggagtgagta 130
||||||||||||||||||||| |||||
Sbjct: 31 gacaagaattatggaacggagggagta 5
>RF00906;MIR1122;EU730902.1/42384-42258 15368:Brachypodium
distachyon
Length = 127
Score = 135 bits (68), Expect = 2e-31
Identities = 107/119 (89%), Gaps = 2/119 (1%)
Strand = Plus / Plus
Query: 14 tactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctattcc 73
|||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||||||
Sbjct: 5 tactccctccgttccataattcttgtctcaaattaacccaaaaatggatgtatctattcc 64
Query: 74 tgaaaagt--gtctagatacatgtaatatttcgacaagaattatggaacggagtgagta 130
| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 65 taaaaaacacgtctagatacatgtaatatttcgacaagaattatggaacggagggagta 123
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 14 tactccctccgttccataattctt 37
||||||||||||||||||||||||
Sbjct: 123 tactccctccgttccataattctt 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 104 gacaagaattatggaacggagtgagta 130
||||||||||||||||||||| |||||
Sbjct: 31 gacaagaattatggaacggagggagta 5
>RF00906;MIR1122;EU730898.1/63863-63739 15368:Brachypodium
distachyon
Length = 125
Score = 123 bits (62), Expect = 7e-28
Identities = 102/114 (89%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 19 cctccgttccataattcttc-tctcaaatttgtccaaatatgaatgtatctattcctgaa 77
|||||||||||||||| || ||||||||||| ||||| |||||||||||||| || ||
Sbjct: 117 cctccgttccataattttttgtctcaaatttgcccaaaattgaatgtatctattactaaa 58
Query: 78 aagtgtctagatacatgtaatatttcgacaagaattatggaacggagtgagtat 131
||| ||||||||||| ||||| ||||||||||||||||||||||||| ||||||
Sbjct: 57 aagcgtctagatacacgtaatgtttcgacaagaattatggaacggagggagtat 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 aatactccctccgttccataattctt 37
||||||||||||||||||||||||||
Sbjct: 3 aatactccctccgttccataattctt 28
>RF00906;MIR1122;EF059989.1/222260-222384 29664:Brachypodium
sylvaticum
Length = 125
Score = 119 bits (60), Expect = 1e-26
Identities = 105/120 (87%)
Strand = Plus / Plus
Query: 12 aatactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctatt 71
|||||| |||||||| |||||||||| ||| |||||||||||| ||| |||||| ||||
Sbjct: 3 aatactacctccgtttcataattcttggctcgaatttgtccaaaaatggatgtatatatt 62
Query: 72 cctgaaaagtgtctagatacatgtaatatttcgacaagaattatggaacggagtgagtat 131
| | |||| |||||||||||||||| |||||||||||||||||| ||||||| ||||||
Sbjct: 63 cataaaaaacgtctagatacatgtaagatttcgacaagaattatgaaacggagggagtat 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 taatactccctccgttccataattctt 37
|||||||||||||||| ||||||||||
Sbjct: 124 taatactccctccgtttcataattctt 98
>RF00906;MIR1122;EU730902.1/55282-55158 15368:Brachypodium
distachyon
Length = 125
Score = 113 bits (57), Expect = 7e-25
Identities = 102/117 (87%)
Strand = Plus / Plus
Query: 14 tactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctattcc 73
||||| ||||||| |||||||||| ||||||||||| |||| ||| ||||||||||| |
Sbjct: 5 tactctctccgtttcataattcttgtctcaaatttgctcaaagatggatgtatctatttc 64
Query: 74 tgaaaagtgtctagatacatgtaatatttcgacaagaattatggaacggagtgagta 130
| ||| | |||||||||||||||||||||||||| |||||| | ||||||| |||||
Sbjct: 65 taaaatgcgtctagatacatgtaatatttcgacatgaattacgaaacggagggagta 121
>RF00906;MIR1122;EU730896.1/41625-41750 15368:Brachypodium
distachyon
Length = 126
Score = 111 bits (56), Expect = 3e-24
Identities = 99/112 (88%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 20 ctccgttccataattcttctctcaaatttg-tccaaatatgaatgtatctattcctgaaa 78
|||||||||||||||||| ||||||||||| | ||| ||| |||||| |||||| |||
Sbjct: 11 ctccgttccataattcttgtctcaaatttgataaaaaaatggatgtatttattccgaaaa 70
Query: 79 agtgtctagatacatgtaatatttcgacaagaattatggaacggagtgagta 130
|||||||||||| |||||||||| ||||||||||||||||||||| |||||
Sbjct: 71 agtgtctagatatatgtaatattgagacaagaattatggaacggagggagta 122
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 14 tactccctccgttccataattcttctctcaa 44
|||||||||||||||||||||||| ||||||
Sbjct: 122 tactccctccgttccataattcttgtctcaa 92
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 104 gacaagaattatggaacggagtga 127
||||||||||||||||||||||||
Sbjct: 31 gacaagaattatggaacggagtga 8
>RF00906;MIR1122;EF059989.1/54267-54145 29664:Brachypodium
sylvaticum
Length = 123
Score = 107 bits (54), Expect = 4e-23
Identities = 102/117 (87%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 14 tactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctattcc 73
||||||||||||| |||||||||| |||||||||| ||||| ||| |||||||||||
Sbjct: 5 tactccctccgtttcataattcttgtctcaaattt--ccaaaaatggatgtatctatttt 62
Query: 74 tgaaaagtgtctagatacatgtaatatttcgacaagaattatggaacggagtgagta 130
|||| | |||||||||||||||||||||||| |||||||||| |||||| |||||
Sbjct: 63 aaaaaaatatctagatacatgtaatatttcgacgagaattatgggacggagggagta 119
>RF00906;MIR1122;EF059989.1/222136-222013 29664:Brachypodium
sylvaticum
Length = 124
Score = 105 bits (53), Expect = 2e-22
Identities = 102/117 (87%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 14 tactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctattcc 73
||||||||||| || | ||||||| ||||||||||| ||||||||| ||||||||||||
Sbjct: 120 tactccctccgatcta-aattcttgtctcaaatttgcccaaatatggatgtatctattct 62
Query: 74 tgaaaagtgtctagatacatgtaatatttcgacaagaattatggaacggagtgagta 130
| ||| | ||||||||||||||||||||||||||| |||| ||| ||||| |||||
Sbjct: 61 taaaacgcgtctagatacatgtaatatttcgacaataatttaggatcggagggagta 5
>RF00906;MIR1122;EF059989.1/55128-55252 29664:Brachypodium
sylvaticum
Length = 125
Score = 99.6 bits (50), Expect = 1e-20
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 12 aatactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctatt 71
||||||||||| | ||| ||||||| |||||||||| ||||||||| || ||||||||
Sbjct: 123 aatactccctctgatcctaaattcttgactcaaatttgcccaaatatggatatatctatt 64
Query: 72 cctgaaaagtgtctagatacatgtaatatttcgacaagaatt 113
| | ||||| ||||||||||||||||||||||||||| ||||
Sbjct: 63 cttaaaaagcgtctagatacatgtaatatttcgacaacaatt 22
>RF00906;MIR1122;EU730895.1/40339-40463 15368:Brachypodium
distachyon
Length = 125
Score = 97.6 bits (49), Expect = 4e-20
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 14 tactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctattcc 73
||||||||||| |||||| | ||| ||||||||||| |||||||||||||||||||
Sbjct: 121 tactccctccgatccatattacttgtctcaaatttgatcaaatatgaatgtatctatgtt 62
Query: 74 tgaaaagtgtctagatacatgtaatatttcgacaagaattatggaacggagtgagta 130
| ||||||| ||||||| |||||||||||||||||| | ||||| ||||| |||||
Sbjct: 61 taaaaagtgactagataaatgtaatatttcgacaagtaatatgggtcggagggagta 5
>RF00906;MIR1122;EU730901.1/161594-161470 15368:Brachypodium
distachyon
Length = 125
Score = 95.6 bits (48), Expect = 2e-19
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 39 tctcaaatttgtccaaatatgaatgtatctattcctgaaaagtgtctagatacatgtaat 98
||||||||||| ||| ||||| |||||||||| ||| ||||| |||||||||||||||||
Sbjct: 30 tctcaaatttgcccagatatggatgtatctatgcctaaaaagcgtctagatacatgtaat 89
Query: 99 atttcgacaagaattatggaacggagtgagta 130
|||||||||| | |||||| ||||| |||||
Sbjct: 90 atttcgacaactaatatggatcggagggagta 121
>RF00906;MIR1122;EU730902.1/30283-30160 15368:Brachypodium
distachyon
Length = 124
Score = 93.7 bits (47), Expect = 6e-19
Identities = 102/119 (85%), Gaps = 1/119 (0%)
Strand = Plus / Plus
Query: 12 aatactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctatt 71
|||||||||||| || |||||||||| ||||||||||| ||||| ||| ||||| |||||
Sbjct: 3 aatactccctccatttcataattcttgtctcaaatttgcccaaaaatg-atgtagctatt 61
Query: 72 cctgaaaagtgtctagatacatgtaatatttcgacaagaattatggaacggagtgagta 130
|| ||||| || ||||| ||| | |||||||||||||||||||| |||||| |||||
Sbjct: 62 tctaaaaagcgtttagatgcatctgatatttcgacaagaattatgagacggagggagta 120
>RF00906;MIR1122;EF059989.1/156495-156619 29664:Brachypodium
sylvaticum
Length = 125
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 39 tctcaaatttgtccaaatatgaatgtatctattcctgaaaagtgtctagatacatgtaat 98
||||||||||||||||||| |||||||||||| | ||||| |||||||||||||||||
Sbjct: 96 tctcaaatttgtccaaatacgaatgtatctatgtgtaaaaagagtctagatacatgtaat 37
Query: 99 atttcgacaag 109
|||||||||||
Sbjct: 36 atttcgacaag 26
>RF00906;MIR1122;EU730895.1/43836-43713 15368:Brachypodium
distachyon
Length = 124
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 39 tctcaaatttgtccaaatatgaatgtatctattcctgaaaagtgtctagatacatgtaat 98
||||||||||| ||||||||| |||||||||| ||| ||||| ||||||||||||||||
Sbjct: 29 tctcaaatttgcccaaatatggatgtatctatacctaaaaagcatctagatacatgtaat 88
Query: 99 atttcgaca 107
|||||||||
Sbjct: 89 atttcgaca 97
>RF00906;MIR1122;EF059989.1/56206-56082 29664:Brachypodium
sylvaticum
Length = 125
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 40 ctcaaatttgtccaaatatgaatgtatctattcctgaaaagtgtctagatacatgtaata 99
|||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||
Sbjct: 95 ctcaaatttgtccaaatatggatgtatctatgtctaaaaagtgtctagatacatgtaata 36
>RF00906;MIR1122;EF059989.1/52700-52824 29664:Brachypodium
sylvaticum
Length = 125
Score = 87.7 bits (44), Expect = 4e-17
Identities = 83/96 (86%)
Strand = Plus / Minus
Query: 14 tactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctattcc 73
||||||||||| ||||| | ||| ||||||||||| ||||||| ||||| ||||||
Sbjct: 121 tactccctccgacccatattacttgtctcaaatttgcccaaatacgaatgcatctatgtt 62
Query: 74 tgaaaagtgtctagatacatgtaatatttcgacaag 109
| ||||| ||||||||||||||||||||||||||||
Sbjct: 61 taaaaagcgtctagatacatgtaatatttcgacaag 26
>RF00906;MIR1122;EU730894.1/127135-127259 15368:Brachypodium
distachyon
Length = 125
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 39 tctcaaatttgtccaaatatgaatgtatctattcctgaaaagtgtctagatacatgtaat 98
||||||||||| ||||||| ||||||||||| | |||||||||||||||||||||||
Sbjct: 96 tctcaaatttgcccaaatacgaatgtatctacgtgtaaaaagtgtctagatacatgtaat 37
Query: 99 atttcgacaag 109
|||||||||||
Sbjct: 36 atttcgacaag 26
>RF00906;MIR1122;EU730900.1/18513-18389 15368:Brachypodium
distachyon
Length = 125
Score = 79.8 bits (40), Expect = 9e-15
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 39 tctcaaatttgtccaaatatgaatgtatctattcctgaaaagtgtctagatacatgtaat 98
|||||||||| ||||||||| |||||||||| ||| ||||| || ||||||||||||||
Sbjct: 96 tctcaaattttcccaaatatggatgtatctatgcctaaaaagcgtttagatacatgtaat 37
Query: 99 atttcgacaagaattatggaacggagtgagta 130
|||| ||||| | |||||| ||||| |||||
Sbjct: 36 attttgacaattaatatggatcggagggagta 5
>RF00906;MIR1122;FJ234838.1/106075-106199 29664:Brachypodium
sylvaticum
Length = 125
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 40 ctcaaatttgtccaaatatgaatgtatctattcctgaaaagtgtctagatacatgtaata 99
|||||||||||||||||||| |||||||||| | | ||||| ||||||||||||||||||
Sbjct: 31 ctcaaatttgtccaaatatggatgtatctatgcttaaaaagcgtctagatacatgtaata 90
>RF00906;MIR1122;EF059989.1/223398-223521 29664:Brachypodium
sylvaticum
Length = 124
Score = 77.8 bits (39), Expect = 4e-14
Identities = 94/111 (84%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 14 tactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctattcc 73
||||||||| || ||||| | || |||| ||||||||||||||| |||||| ||| ||
Sbjct: 5 tactccctctgtcccatattaattgtctcgaatttgtccaaatatagatgtatttatacc 64
Query: 74 tgaaaagtgtctagatacatgtaatatttcgacaagaattatggaacggag 124
| ||||| |||| |||||||||||||||||||||| | ||||||||||||
Sbjct: 65 taaaaag-gtctggatacatgtaatatttcgacaattaatatggaacggag 114
>RF00906;MIR1122;EF059989.1/352416-352302 29664:Brachypodium
sylvaticum
Length = 115
Score = 63.9 bits (32), Expect = 5e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 51 ccaaatatgaatgtatctattcctgaaaagtgtctagatacatgtaatatttcgacaaga 110
||||||||| |||||||||| | | |||| ||||||||||||||||||||| |||||
Sbjct: 32 ccaaatatggatgtatctatgcataaaaaacgtctagatacatgtaatattttgacaatt 91
Query: 111 attatggaacggagtgagta 130
| |||||| ||||| |||||
Sbjct: 92 aatatggatcggagggagta 111
>RF00906;MIR1122;EF059989.1/159537-159414 29664:Brachypodium
sylvaticum
Length = 124
Score = 63.9 bits (32), Expect = 5e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 41 tcaaatttgtccaaatatgaatgtatctattcctgaaaagtgtctagatacatgtaatat 100
||||||| |||||||||||| ||||||||| | ||||| |||||||||||||||||||
Sbjct: 32 tcaaattcgtccaaatatgattgtatctatatca-aaaagcgtctagatacatgtaatat 90
Query: 101 ttcg 104
||||
Sbjct: 91 ttcg 94
>RF00906;MIR1122;EF059989.1/67137-67261 29664:Brachypodium
sylvaticum
Length = 125
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 39 tctcaaatttgtccaaatatgaatgtatctattcctgaaaagtgtctagatacatgtaat 98
||||||| ||| ||||||||| |||||| ||| | | ||||| || ||||||||||||||
Sbjct: 30 tctcaaaattgcccaaatatggatgtatatatgcgtaaaaagcgtttagatacatgtaat 89
Query: 99 atttcga 105
|||||||
Sbjct: 90 atttcga 96
>RF00906;MIR1122;EU730894.1/121201-121325 15368:Brachypodium
distachyon
Length = 125
Score = 60.0 bits (30), Expect = 8e-09
Identities = 96/118 (81%)
Strand = Plus / Plus
Query: 14 tactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatctattcc 73
||||||||||| ||||| | ||| || |||||||| |||| |||| |||| || ||
Sbjct: 5 tactccctccgacccatattacttgtcacaaatttgcccaattatggatgtgtcaatgtt 64
Query: 74 tgaaaagtgtctagatacatgtaatatttcgacaagaattatggaacggagtgagtat 131
| ||||| ||||||||||||||||||||||||||| | ||||| ||||| ||||||
Sbjct: 65 taaaaagcatctagatacatgtaatatttcgacaagtaatatgggtcggagggagtat 122
>RF00906;MIR1122;DQ890018.1/183-48 77009:Hordeum vulgare subsp.
spontaneum
Length = 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 13 atactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatcta 69
||||||||||||||||| ||||||| ||| | |||||| | |||||||||||||||
Sbjct: 4 atactccctccgttccaaaattcttgtcttagatttgtttagatatgaatgtatcta 60
>RF00906;MIR1122;AF254799.1/46723-46588 4513:Hordeum vulgare
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 14 tactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatcta 69
|||||| ||||| ||| ||||||| ||| ||||||||| | |||||||||||||||
Sbjct: 5 tactccttccgtcccaaaattcttgtcttaaatttgtctatatatgaatgtatcta 60
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 aatactccctccgttccataattctt 37
|||||||||||||||||| |||||||
Sbjct: 134 aatactccctccgttccaaaattctt 109
>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 14 tactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatcta 69
|||||||||||| ||| ||||||| ||| | ||||||| | |||||||||||||||
Sbjct: 5 tactccctccgtcccaaaattcttgtcttacatttgtctagatatgaatgtatcta 60
>RF00906;MIR1122;FJ374610.1/683-817 4568:Triticum monococcum
Length = 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 12 aatactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatcta 69
|||||||||||||| ||| ||||||| ||| | ||||||| | ||||| |||||||||
Sbjct: 133 aatactccctccgtcccaaaattcttgtcttagatttgtctagatatggatgtatcta 76
>RF00906;MIR1122;AY485644.1/84291-84425 4568:Triticum monococcum
Length = 135
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 14 tactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtat 66
|||||||||||| ||| |||| || ||| ||||||||| ||||||| ||||||
Sbjct: 5 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtat 57
>RF00906;MIR1122;EU096089.1/14944-15085 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 142
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 10 ttaatactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtat 66
|||||||||||||||| ||| | ||||| ||| | ||||||| | ||||||||||||
Sbjct: 1 ttaatactccctccgtcccaaacttcttgtcttagatttgtctagatatgaatgtat 57
>RF00906;MIR1122;DQ890004.1/48-183 4513:Hordeum vulgare
Length = 136
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 13 atactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatcta 69
||||| ||||||||||| ||||||| ||| | |||||| | |||||||||||||||
Sbjct: 133 atactacctccgttccaaaattcttgtcttagatttgtttagatatgaatgtatcta 77
>RF00906;MIR1122;AM180263.1/1164-1082 4513:Hordeum vulgare
Length = 83
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 103 cgacaagaattatggaacggagtgagta 130
|||||||||||||||||||||| |||||
Sbjct: 32 cgacaagaattatggaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgttccataattctt 37
||||||||||||||||||||||||
Sbjct: 5 tactccctccgttccataattctt 28
>RF00906;MIR1122;EU730901.1/65072-65195 15368:Brachypodium
distachyon
Length = 124
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 82 gtctagatacatgtaatatttcgacaag 109
|||||||||||| |||||||||||||||
Sbjct: 53 gtctagatacatataatatttcgacaag 26
>RF00906;MIR1122;EU730900.1/55128-55253 15368:Brachypodium
distachyon
Length = 126
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 82 gtctagatacatgtaatatttcga 105
||||||||||||||||||||||||
Sbjct: 53 gtctagatacatgtaatatttcga 30
>RF00906;MIR1122;DQ145528.1/676-542 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 31 aattcttctctcaaatttgtccaaatatgaatgtatcta 69
||||||| ||| | ||||||| |||||||||||||||||
Sbjct: 22 aattcttgtcttagatttgtctaaatatgaatgtatcta 60
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 14 tactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatc 67
|||||||||||| ||| ||||||| ||| | ||||||| ||||| | |||||||
Sbjct: 5 tactccctccgtcccaaaattcttgtcttagatttgtctaaatacggatgtatc 58
>RF00906;MIR1122;AF277239.1/1056-1190 37679:Heteranthelium
piliferum
Length = 135
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 12 aatactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatcta 69
|||||||||||||| ||| ||||||| || | ||||||| ||||| | |||||||||
Sbjct: 3 aatactccctccgtcccaaaattcttgtcatagatttgtctaaatacggatgtatcta 60
>RF00906;MIR1122;EF059989.1/226094-226187 29664:Brachypodium
sylvaticum
Length = 94
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 taatactccctccgttccataa 32
||||||||||||||||||||||
Sbjct: 93 taatactccctccgttccataa 72
