miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00641;mir-154;AAGU02626700.1/154-230 9785:Loxodonta africana
          (African savanna elephant)
          Length = 77

 Score =  129 bits (65), Expect = 6e-30
 Identities = 74/77 (96%)
 Strand = Plus / Plus

                                                                      
Query: 2  ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 61
          ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1  ggtactcggggagaggttacccgagcaactttgcatctggacgacgaatgttgctcggtg 60

                           
Query: 62 aaccccttttcggtatc 78
          |||||||| ||||||||
Sbjct: 61 aaccccttctcggtatc 77




>RF00641;mir-154;AAKN02051949.1/132763-132839 10141:Cavia
          porcellus (domestic guinea pig)
          Length = 77

 Score =  113 bits (57), Expect = 3e-25
 Identities = 72/77 (93%)
 Strand = Plus / Plus

                                                                      
Query: 2  ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 61
          ||||| |||||||||||||||| |||||||||||||||| |  |||||||||||||||||
Sbjct: 1  ggtacccggagagaggttacccaagcaactttgcatctgaacaacgaatgttgctcggtg 60

                           
Query: 62 aaccccttttcggtatc 78
          |||||||||||||||||
Sbjct: 61 aaccccttttcggtatc 77