miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00870;mir-423;AAIY01635034.1/442-362 9371:Echinops telfairi
          (small Madagascar hedgehog)
          Length = 81

 Score =  161 bits (81), Expect = 2e-39
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 17 aggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctga 76
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  aggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctga 60

                               
Query: 77 ggcccctcagtcttgcttcct 97
          |||||||||||||||||||||
Sbjct: 61 ggcccctcagtcttgcttcct 81




>RF00870;mir-423;AAGU02429216.1/1470-1554 9785:Loxodonta africana
          (African savanna elephant)
          Length = 85

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 21 agttaggctgaggggcagagagcgagactttt 52
          ||||||| ||||||||||||||||||||||||
Sbjct: 5  agttagggtgaggggcagagagcgagactttt 36