miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00872;mir-652;ABRP01145045.1/4347-4444 132908:Pteropus vampyrus
(large flying fox)
Length = 98
Score = 133 bits (67), Expect = 5e-31
Identities = 85/91 (93%)
Strand = Plus / Plus
Query: 8 gctatgtactgcacaaccctaggagggggtgccattcacatagagtataattgaatggcg 67
|||||||||||||||||||||||| | |||||||||||||||| || ||||||||||||
Sbjct: 8 gctatgtactgcacaaccctaggaatgtgtgccattcacatagactaaaattgaatggcg 67
Query: 68 ccactagggttgtgcagtgtacagcctacac 98
||||||||||||||||||||||| |||||||
Sbjct: 68 ccactagggttgtgcagtgtacaacctacac 98
>RF00872;mir-652;ABRQ01225516.1/4631-4728 9813:Procavia capensis
(cape rock hyrax)
Length = 98
Score = 133 bits (67), Expect = 5e-31
Identities = 85/91 (93%)
Strand = Plus / Plus
Query: 8 gctatgtactgcacaaccctaggagggggtgccattcacatagagtataattgaatggcg 67
|||||| |||||||||||||||||| |||||||||||||||||| | |||||||||||||
Sbjct: 8 gctatgcactgcacaaccctaggagagggtgccattcacatagactgtaattgaatggcg 67
Query: 68 ccactagggttgtgcagtgtacagcctacac 98
||||||||||||||||||| ||| |||||||
Sbjct: 68 ccactagggttgtgcagtgcacaacctacac 98
>RF00872;mir-652;AALT01529428.1/6713-6810 42254:Sorex araneus
(European shrew)
Length = 98
Score = 113 bits (57), Expect = 4e-25
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 19 cacaaccctaggagggggtgccattcacatagagtataattgaatggcgccactagggtt 78
||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 19 cacaaccctagtagatggtgccattcacatagactataattgaatggcgccactagggtt 78
Query: 79 gtgcagtgtacagccta 95
|||||||| ||||||||
Sbjct: 79 gtgcagtgcacagccta 95
