miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00775;mir-432;ABRQ01643018.1/1316-1409 9813:Procavia capensis
(cape rock hyrax)
Length = 94
Score = 137 bits (69), Expect = 3e-32
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 4 tgactcctccaagtcttggagtaggtcattgggtggatcctttatttccctatgtgggcc 63
||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 1 tgactcctccatgtcttggagtaggtcattgggtggatcctctatttcctgatgtgggcc 60
Query: 64 actggatggctcctccatgtcttgg 88
|||||||||||||||||||||||||
Sbjct: 61 actggatggctcctccatgtcttgg 85
>RF00775;mir-432;AANN01125399.1/1129-1222 9365:Erinaceus europaeus
(western European hedgehog)
Length = 94
Score = 115 bits (58), Expect = 1e-25
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 9 cctccaagtcttggagtaggtcattgggtggatcctttatttccctatgtgggccactgg 68
|||||| |||||||||||||||||||||||||||| | |||| ||| ||||||||||||
Sbjct: 6 cctccacgtcttggagtaggtcattgggtggatccgtgttttcgctacgtgggccactgg 65
Query: 69 atggctcctccatgtcttggcg 90
||||||||||||||||||||||
Sbjct: 66 atggctcctccatgtcttggcg 87
>RF00775;mir-432;AAWR02000650.1/140788-140727 9796:Equus caballus
(horse)
Length = 62
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 tgactcctccaagtcttggagtaggtc 30
|||||||||||||||||| ||||||||
Sbjct: 1 tgactcctccaagtcttgcagtaggtc 27
>RF00775;mir-432;EU434918.1/822-729 10090:Mus musculus (house
mouse)
Length = 94
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 gggccactggatggctcctcca 80
||||||||||||||||||||||
Sbjct: 56 gggccactggatggctcctcca 77
