miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00270;SNORD61;AAFC03028609.1/18530-18459 9913:Bos taurus
(cattle)
Length = 72
Score = 65.9 bits (33), Expect = 7e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 44 gctatgatgactttgattgcattgatcacatga 76
|||||||||||||||||||||||||||||||||
Sbjct: 1 gctatgatgactttgattgcattgatcacatga 33
>RF01170;snoU61;AAGW01145968.1/1005-932 9986:Oryctolagus cuniculus
(rabbit)
Length = 74
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 42 gagctatgatgactttgattgcattgatca 71
|||||||||||| |||||||||||||||||
Sbjct: 1 gagctatgatgaatttgattgcattgatca 30
>RF01170;snoU61;AAWR02034100.1/59890-59817 9796:Equus caballus
(horse)
Length = 74
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 43 agctatgatgactttgattgcattgat 69
||||||||||| |||||||||||||||
Sbjct: 2 agctatgatgaatttgattgcattgat 28
>RF01170;snoU61;ABDC01371259.1/3999-3928 30608:Microcebus murinus
(gray mouse lemur)
Length = 72
Score = 44.1 bits (22), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 43 agctatgatgactttgattgcattgatcacatga 76
||||||||||| |||||||||| |||||| ||||
Sbjct: 2 agctatgatgaatttgattgcactgatcatatga 35
>RF01170;snoU61;AAGW01177627.1/1824-1751 9986:Oryctolagus
cuniculus (rabbit)
Length = 74
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 43 agctatgatgactttgattgcattgatca 71
||||||||||| ||| |||||||||||||
Sbjct: 2 agctatgatgaatttaattgcattgatca 30
