miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00871;mir-689;ABVD01824659.1/599-703 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 105
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 82 cgtcgggaccggggtccggtgcgg 105
>RF00871;mir-689;AAGV020502640.1/197-263 9361:Dasypus novemcinctus
(nine-banded armadillo)
Length = 67
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 44 cgtcgggaccggggtccggtgcgg 67
>RF00871;mir-689;AAPE01569130.1/567-464 59463:Myotis lucifugus
(little brown bat)
Length = 104
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 81 cgtcgggaccggggtccggtgcgg 104
>RF00871;mir-689;AAPE01051559.1/3068-3164 59463:Myotis lucifugus
(little brown bat)
Length = 97
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 74 cgtcgggaccggggtccggtgcgg 97
>RF00871;mir-689;AAPE01336642.1/781-881 59463:Myotis lucifugus
(little brown bat)
Length = 101
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 78 cgtcgggaccggggtccggtgcgg 101
>RF00871;mir-689;ABRP01348725.1/1139-1240 132908:Pteropus vampyrus
(large flying fox)
Length = 102
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 79 cgtcgggaccggggtccggtgcgg 102
>RF00871;mir-689;ABRN01081710.1/627-521 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 107
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 84 cgtcgggaccggggtccggtgcgg 107
>RF00871;mir-689;ABRN01061137.1/1035-1140 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 106
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 83 cgtcgggaccggggtccggtgcgg 106
>RF00871;mir-689;AAPY01395355.1/323-425 37347:Tupaia belangeri
(northern tree shrew)
Length = 103
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 80 cgtcgggaccggggtccggtgcgg 103
>RF00871;mir-689;AAPY01417682.1/1368-1468 37347:Tupaia belangeri
(northern tree shrew)
Length = 101
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 78 cgtcgggaccggggtccggtgcgg 101
>RF00871;mir-689;ABDC01624632.1/773-660 30608:Microcebus murinus
(gray mouse lemur)
Length = 114
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 91 cgtcgggaccggggtccggtgcgg 114
>RF00871;mir-689;AAHX01316076.1/113-2 10116:Rattus norvegicus
(Norway rat)
Length = 112
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 89 cgtcgggaccggggtccggtgcgg 112
>RF00871;mir-689;AAXL01001682.1/144-34 10116:Rattus norvegicus
(Norway rat)
Length = 111
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 88 cgtcgggaccggggtccggtgcgg 111
>RF00871;mir-689;AC160935.2/47670-47748 10090:Mus musculus (house
mouse)
Length = 79
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 56 cgtcgggaccggggtccggtgcgg 79
>RF00871;mir-689;AAHY01041222.1/6047-6139 10090:Mus musculus
(house mouse)
Length = 93
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 70 cgtcgggaccggggtccggtgcgg 93
>RF00871;mir-689;AAHY01357033.1/923-815 10090:Mus musculus (house
mouse)
Length = 109
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 86 cgtcgggaccggggtccggtgcgg 109
>RF00871;mir-689;ABRO01001534.1/878-774 10020:Dipodomys ordii (Ord's
kangaroo rat)
Length = 105
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 82 cgtcgggaccggggtccggtgcgg 105
>RF00871;mir-689;ABRO01001557.1/1081-969 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 113
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 90 cgtcgggaccggggtccggtgcgg 113
>RF00871;mir-689;AAKN02059111.1/1843-1730 10141:Cavia porcellus
(domestic guinea pig)
Length = 114
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 91 cgtcgggaccggggtccggtgcgg 114
>RF00871;mir-689;AAYZ01468860.1/1287-1176 9978:Ochotona princeps
(American pika)
Length = 112
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 89 cgtcgggaccggggtccggtgcgg 112
>RF00871;mir-689;AAYZ01378573.1/1169-1278 9978:Ochotona princeps
(American pika)
Length = 110
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 87 cgtcgggaccggggtccggtgcgg 110
>RF00871;mir-689;AAIY01023010.1/1635-1560 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 76
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 53 cgtcgggaccggggtccggtgcgg 76
>RF00871;mir-689;AAIY01655835.1/3327-3420 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 94
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 71 cgtcgggaccggggtccggtgcgg 94
>RF00871;mir-689;AAIY01230358.1/297-179 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 119
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 96 cgtcgggaccggggtccggtgcgg 119
>RF00871;mir-689;AAIY01808979.1/670-548 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 123
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 100 cgtcgggaccggggtccggtgcgg 123
>RF00871;mir-689;AAIY01663766.1/3896-3804 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 93
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 70 cgtcgggaccggggtccggtgcgg 93
>RF00871;mir-689;AAIY01624836.1/203-108 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 96
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 73 cgtcgggaccggggtccggtgcgg 96
>RF00871;mir-689;ABRQ01788070.1/721-824 9813:Procavia capensis (cape
rock hyrax)
Length = 104
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cgtcgggaccggggtccggtgcgg 24
||||||||||||||||||||||||
Sbjct: 81 cgtcgggaccggggtccggtgcgg 104
>RF00871;mir-689;AAWR02027551.1/257-180 9796:Equus caballus
(horse)
Length = 78
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3 tcgggaccggggtccggtgcgg 24
||||||||||||||||||||||
Sbjct: 57 tcgggaccggggtccggtgcgg 78
>RF00871;mir-689;AADA01187662.1/634-513 9598:Pan troglodytes
(chimpanzee)
Length = 122
Score = 42.1 bits (21), Expect = 7e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 cgggaccggggtccggtgcgg 24
|||||||||||||||||||||
Sbjct: 102 cgggaccggggtccggtgcgg 122
>RF00871;mir-689;AADA01173172.1/928-809 9598:Pan troglodytes
(chimpanzee)
Length = 120
Score = 42.1 bits (21), Expect = 7e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 cgggaccggggtccggtgcgg 24
|||||||||||||||||||||
Sbjct: 100 cgggaccggggtccggtgcgg 120
>RF00871;mir-689;AJ334298.1/164-49 9606:Homo sapiens (human)
Length = 116
Score = 42.1 bits (21), Expect = 7e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 cgggaccggggtccggtgcgg 24
|||||||||||||||||||||
Sbjct: 96 cgggaccggggtccggtgcgg 116
>RF00871;mir-689;ABBA01251977.1/610-725 9606:Homo sapiens (human)
Length = 116
Score = 42.1 bits (21), Expect = 7e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 cgggaccggggtccggtgcgg 24
|||||||||||||||||||||
Sbjct: 96 cgggaccggggtccggtgcgg 116
>RF00871;mir-689;M27830.1/279-393 9606:Homo sapiens (human)
Length = 115
Score = 42.1 bits (21), Expect = 7e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 cgggaccggggtccggtgcgg 24
|||||||||||||||||||||
Sbjct: 95 cgggaccggggtccggtgcgg 115
>RF00871;mir-689;AJ334227.1/165-48 9606:Homo sapiens (human)
Length = 118
Score = 42.1 bits (21), Expect = 7e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 cgggaccggggtccggtgcgg 24
|||||||||||||||||||||
Sbjct: 98 cgggaccggggtccggtgcgg 118
>RF00871;mir-689;S78388.1/59-169 9606:Homo sapiens (human)
Length = 111
Score = 42.1 bits (21), Expect = 7e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 cgggaccggggtccggtgcgg 24
|||||||||||||||||||||
Sbjct: 91 cgggaccggggtccggtgcgg 111
>RF00871;mir-689;CABD01786770.1/348-456 9595:Gorilla gorilla gorilla
(Western lowland gorilla)
Length = 109
Score = 42.1 bits (21), Expect = 7e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 cgggaccggggtccggtgcgg 24
|||||||||||||||||||||
Sbjct: 89 cgggaccggggtccggtgcgg 109
>RF00871;mir-689;CABD01744586.1/395-503 9595:Gorilla gorilla gorilla
(Western lowland gorilla)
Length = 109
Score = 42.1 bits (21), Expect = 7e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 cgggaccggggtccggtgcgg 24
|||||||||||||||||||||
Sbjct: 89 cgggaccggggtccggtgcgg 109
>RF00871;mir-689;AB171103.1/675-770 9541:Macaca fascicularis
(crab-eating macaque)
Length = 96
Score = 42.1 bits (21), Expect = 7e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 cgggaccggggtccggtgcgg 24
|||||||||||||||||||||
Sbjct: 76 cgggaccggggtccggtgcgg 96
>RF00871;mir-689;AAGU02956073.1/800-917 9785:Loxodonta africana
(African savanna elephant)
Length = 118
Score = 42.1 bits (21), Expect = 7e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 cgggaccggggtccggtgcgg 24
|||||||||||||||||||||
Sbjct: 98 cgggaccggggtccggtgcgg 118
