miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00455;mir-15;AADN02005381.1/19629-19713 9031:Gallus gallus
(chicken)
Length = 85
Score = 129 bits (65), Expect = 6e-30
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 11 gtagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcctca 70
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 14 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 73
Query: 71 aaaatacaa 79
|||||||||
Sbjct: 74 aaaatacaa 82
>RF00455;mir-15;ABRP01194837.1/2584-2662 132908:Pteropus vampyrus
(large flying fox)
Length = 79
Score = 81.8 bits (41), Expect = 1e-15
Identities = 62/67 (92%), Gaps = 4/67 (5%)
Strand = Plus / Plus
Query: 9 aagtagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcct 68
|||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 10 aagtagcagcacataatg--ttgtggatttg--aaaggtgcaggccatattgtgctgcct 65
Query: 69 caaaaat 75
|||||||
Sbjct: 66 caaaaat 72
>RF00455;mir-15;AAVX01075355.1/1195-1112 7868:Callorhinchus milii
(ghost shark)
Length = 84
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 gtagcagcacataatggtttgtg 33
|||||||||||||||||||||||
Sbjct: 14 gtagcagcacataatggtttgtg 36
