miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00666;mir-32;AADN02008141.1/23543-23474 9031:Gallus gallus
(chicken)
Length = 70
Score = 123 bits (62), Expect = 3e-28
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcagtgcaatttagtgtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcagtgcaatttagtgtgtg 60
Query: 61 tgatattttc 70
|||| ||||
Sbjct: 61 cgatactttc 70
>RF00666;mir-32;ABRT010114804.1/457-518 9478:Tarsius syrichta
(Philippine tarsier)
Length = 62
Score = 48.1 bits (24), Expect = 1e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 11 cacattactaagttgcatgttgtcacggcctcagtgcaatttagtgtgtgtgatat 66
||||||||||||||||||| | ||| | | ||| ||||||||| | ||||||||||
Sbjct: 7 cacattactaagttgcatgctttcatgacatcaatgcaatttaatatgtgtgatat 62
>RF00666;mir-32;AAVX01589492.1/985-916 7868:Callorhinchus milii
(ghost shark)
Length = 70
Score = 42.1 bits (21), Expect = 9e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 1 ggagatattgcacattactaagttgcatgttgt 33
|||| ||||||||| ||| ||||||||||||||
Sbjct: 1 ggaggtattgcacactaccaagttgcatgttgt 33
