miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00456;mir-34;AADN02040793.1/20235-20325 9031:Gallus gallus
(chicken)
Length = 91
Score = 93.7 bits (47), Expect = 3e-19
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 tttctttggcagtgtcttagctggttgttgtgagtaatagcaaaggaagcaatcagc-ag 59
|||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||
Sbjct: 8 tttctttggcagtgtcttagctggttgttgtgagcaatagttaaggaagcaatcagcaag 67
Query: 60 catcctgccctagaa 74
|| |||||||||||
Sbjct: 68 tatactgccctagaa 82
>RF00456;mir-34;AANH01002669.1/122646-122735 69293:Gasterosteus
aculeatus (three-spined stickleback)
Length = 90
Score = 60.0 bits (30), Expect = 4e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 tttctttggcagtgtcttagctggttgttgtgag 34
||||| ||||||||||||||||||||||||||||
Sbjct: 8 tttctctggcagtgtcttagctggttgttgtgag 41
>RF00456;mir-34;AAVX01252978.1/732-820 7868:Callorhinchus milii
(ghost shark)
Length = 89
Score = 56.0 bits (28), Expect = 6e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 tttctttggcagtgtcttagctggttgttgtg 32
||||| ||||||||||||||||||||||||||
Sbjct: 8 tttctctggcagtgtcttagctggttgttgtg 39
