miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00104;mir-10;ABRQ01276450.1/1328-1256 9813:Procavia capensis
(cape rock hyrax)
Length = 73
Score = 139 bits (70), Expect = 5e-33
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 ggcacccacccgtagaaccgaccttgcggggccttcgccgcacacaagctcgtgtctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggcacccacccgtagaaccgaccttgcggggccttcgccgcacacaagctcgtgtctgtg 61
Query: 61 ggtccgtgtc 70
||||||||||
Sbjct: 62 ggtccgtgtc 71
>RF00104;mir-10;ABQO010340902.1/106-34 9315:Macropus eugenii
(tammar wallaby)
Length = 73
Score = 75.8 bits (38), Expect = 6e-14
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 1 ggcacccacccgtagaaccgaccttgcggggccttcgccgcacacaagctcgtgtctgtg 60
|||||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||
Sbjct: 2 ggcacccacccgtagatccgaccttgcggggcgccggccacacacaagctcgagtctgtg 61
Query: 61 ggtccgtgtc 70
|||| |||||
Sbjct: 62 ggtctgtgtc 71
>RF00104;mir-10;ABRT010769923.1/1062-1134 9478:Tarsius syrichta
(Philippine tarsier)
Length = 73
Score = 58.0 bits (29), Expect = 1e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 5 cccacccgtagaaccgaccttgcggggccttcgccgcacacaagctcgtgtctgtgg 61
|||||||||| |||||||||||| | || |||||| |||||| ||||| ||||||||
Sbjct: 6 cccacccgtacaaccgaccttgccgcgcattcgccacacacatgctcgggtctgtgg 62
