miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01038;mir-1307;ABRQ01134390.1/3319-3220 9813:Procavia capensis
(cape rock hyrax)
Length = 100
Score = 135 bits (68), Expect = 9e-32
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 9 ctcgaccggacctcgaccggctcgtctatgttgccaatcgactcggcgtggcgtcggtcg 68
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 20 ctcgaccggacctcgaccggctcgtctgtgttgccaatcgactcggcgtggcgtcggtcg 79
Query: 69 tggtagataggc 80
||||||||||||
Sbjct: 80 tggtagataggc 91
>RF01038;mir-1307;AAPE01621437.1/1559-1459 59463:Myotis lucifugus
(little brown bat)
Length = 101
Score = 73.8 bits (37), Expect = 3e-13
Identities = 70/77 (90%), Gaps = 3/77 (3%)
Strand = Plus / Plus
Query: 5 caatctcgaccggacctcgaccgg-ctcgtctatgttgccaatcgactcggcgtgg-cgt 62
||||||||||||||| |||||||| || || || || ||||||||||||||||||| |||
Sbjct: 16 caatctcgaccggac-tcgaccgggctagtataagtagccaatcgactcggcgtgggcgt 74
Query: 63 cggtcgtggtagatagg 79
|||||||||||||||||
Sbjct: 75 cggtcgtggtagatagg 91
>RF01038;mir-1307;AAPE01033106.1/5936-5847 59463:Myotis lucifugus
(little brown bat)
Length = 90
Score = 69.9 bits (35), Expect = 5e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 45 atcgactcggcgtggcgtcggtcgtggtagatagg 79
|||||||||||||||||||||||||||||||||||
Sbjct: 46 atcgactcggcgtggcgtcggtcgtggtagatagg 80
