miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00005;tRNA;AAPN01064092.1/2282-2353 :
Length = 72
Score = 58.0 bits (29), Expect = 1e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||||||||||| |||||||||| |||||||||
Sbjct: 7 gtggtctagtggttaggattcagcattctcactgctg 43
>RF00005;tRNA;ABRN01449230.1/590-519 :
Length = 72
Score = 58.0 bits (29), Expect = 1e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||||||||||| |||||||| |||||||||||
Sbjct: 7 gtggtctagtggttaggattcagcagtttcactgctg 43
>RF00005;tRNA;FJ042939.1/38205-38276 :
Length = 72
Score = 54.0 bits (27), Expect = 2e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgc 50
|||||||||||||||| |||| |||||||||||||
Sbjct: 7 gtggtctagtggttaggattcggcattttcactgc 41
>RF00005;tRNA;AAFC03066721.1/23823-23894 :
Length = 72
Score = 54.0 bits (27), Expect = 2e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttca 46
|||||||||||||||| ||||||||||||||
Sbjct: 7 gtggtctagtggttaggattcagcattttca 37
>RF00005;tRNA;ABRN01357847.1/1105-1175 :
Length = 71
Score = 54.0 bits (27), Expect = 2e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgc 50
|||||||||||||||| |||||||| |||||||||
Sbjct: 7 gtggtctagtggttaggattcagcactttcactgc 41
>RF00005;tRNA;ABRN01208397.1/23567-23496 :
Length = 72
Score = 54.0 bits (27), Expect = 2e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgc 50
|||||||||||||||| |||||||| |||||||||
Sbjct: 7 gtggtctagtggttaggattcagcactttcactgc 41
>RF00005;tRNA;CT827800.8/52629-52700 :
Length = 72
Score = 52.0 bits (26), Expect = 9e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctgg 53
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 7 gtggtctagtggttaggattcagcactatcactgctgg 44
>RF00005;tRNA;ABRN01123229.1/1584-1514 :
Length = 71
Score = 52.0 bits (26), Expect = 9e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctgg 53
|||||||||||||||| | |||||| ||||||||||||
Sbjct: 7 gtggtctagtggttaggactcagcactttcactgctgg 44
>RF00005;tRNA;ABRN01129899.1/19020-19091 :
Length = 72
Score = 52.0 bits (26), Expect = 9e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 19 gtctagtggttagaattcagcattttcactgctg 52
||||||||||||| |||| |||||||||||||||
Sbjct: 10 gtctagtggttaggattcggcattttcactgctg 43
>RF00005;tRNA;ABRN01432424.1/13940-14012 :
Length = 73
Score = 52.0 bits (26), Expect = 9e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctgg 53
|||||| ||||||||| |||||||| ||||||||||||
Sbjct: 7 gtggtccagtggttaggattcagcactttcactgctgg 44
>RF00005;tRNA;CR956418.10/149337-149265 :
Length = 73
Score = 50.1 bits (25), Expect = 3e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||||||||||| | |||||| |||||||||||
Sbjct: 10 gtggtctagtggttaggactcagcactttcactgctg 46
>RF00005;tRNA;CR956382.7/3046-2979 :
Length = 68
Score = 50.1 bits (25), Expect = 3e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||||||||||| | |||||| |||||||||||
Sbjct: 7 gtggtctagtggttaggactcagcactttcactgctg 43
>RF00005;tRNA;AAFC03092932.1/11428-11359 :
Length = 70
Score = 50.1 bits (25), Expect = 3e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||||||||||| |||||||| |||| ||||||
Sbjct: 5 gtggtctagtggttaggattcagcactttccctgctg 41
>RF00005;tRNA;ABRN01410811.1/2743-2814 :
Length = 72
Score = 50.1 bits (25), Expect = 3e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcact 48
|||||||||||||||| |||||||| |||||||
Sbjct: 7 gtggtctagtggttaggattcagcactttcact 39
>RF00005;tRNA;ABRN01101120.1/3027-2955 :
Length = 73
Score = 50.1 bits (25), Expect = 3e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||| ||||||||| |||||||| |||||||||||
Sbjct: 7 gtggtccagtggttaggattcagcactttcactgctg 43
>RF00005;tRNA;ABRN01300773.1/1791-1862 :
Length = 72
Score = 48.1 bits (24), Expect = 1e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcac 47
|||||||||||||||| |||||||| ||||||
Sbjct: 7 gtggtctagtggttaggattcagcactttcac 38
>RF00005;tRNA;ABRN01332345.1/15650-15579 :
Length = 72
Score = 48.1 bits (24), Expect = 1e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 17 tggtctagtggttagaattcagcattttcact 48
||||||||||||||| |||||||| |||||||
Sbjct: 8 tggtctagtggttaggattcagcactttcact 39
>RF00005;tRNA;AAFC03016859.1/11579-11651 :
Length = 73
Score = 46.1 bits (23), Expect = 5e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttca 46
|||||||||||||||| |||||||| |||||
Sbjct: 7 gtggtctagtggttaggattcagcactttca 37
>RF00005;tRNA;AAFC03032054.1/18641-18712 :
Length = 72
Score = 46.1 bits (23), Expect = 5e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgc 50
||||||||||||||||||||| | ||||||||||
Sbjct: 7 gtggtctagtggttagaattccgggttttcactgc 41
>RF00005;tRNA;ABRN01085769.1/16351-16280 :
Length = 72
Score = 46.1 bits (23), Expect = 5e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgc 50
|||||||||||||| | |||||||| |||||||||
Sbjct: 7 gtggtctagtggttgggattcagcactttcactgc 41
>RF00005;tRNA;ABRN01261366.1/1733-1805 :
Length = 73
Score = 46.1 bits (23), Expect = 5e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttca 46
||||||||||||||||||||| ||| |||||
Sbjct: 7 gtggtctagtggttagaattctgcactttca 37
>RF00005;tRNA;ABRN01337608.1/2901-2830 :
Length = 72
Score = 46.1 bits (23), Expect = 5e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgc 50
|||||||||||||||| |||| ||| |||||||||
Sbjct: 7 gtggtctagtggttaggattcggcactttcactgc 41
>RF00005;tRNA;ABRN01172672.1/890-820 :
Length = 71
Score = 46.1 bits (23), Expect = 5e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgc 50
||||||||||||||| ||||| ||| |||||||||
Sbjct: 7 gtggtctagtggttacaattcggcactttcactgc 41
>RF00005;tRNA;ABRN01184407.1/3016-2945 :
Length = 72
Score = 46.1 bits (23), Expect = 5e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgc 50
|||| ||||||||||| |||| |||||||||||||
Sbjct: 7 gtggcctagtggttaggattcggcattttcactgc 41
>RF00005;tRNA;AAWR02041110.1/67422-67351 :
Length = 72
Score = 44.1 bits (22), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactg 49
||||||||||||||| |||||||| ||||||||
Sbjct: 7 gtggtctagtggttaagattcagcactttcactg 40
>RF00005;tRNA;CR974587.14/32666-32595 :
Length = 72
Score = 44.1 bits (22), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactg 49
|||||||||||||||| ||| |||| ||||||||
Sbjct: 7 gtggtctagtggttaggattgagcactttcactg 40
>RF00005;tRNA;AAFC03121233.1/28875-28946 :
Length = 72
Score = 44.1 bits (22), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactg 49
|||||||||||||||| |||||| | ||||||||
Sbjct: 7 gtggtctagtggttaggattcagtactttcactg 40
>RF00005;tRNA;AAFC03083598.1/33129-33058 :
Length = 72
Score = 44.1 bits (22), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactg 49
|||||||||||||||| |||||||| ||| ||||
Sbjct: 7 gtggtctagtggttaggattcagcactttaactg 40
>RF00005;tRNA;ABRN01116527.1/6546-6617 :
Length = 72
Score = 44.1 bits (22), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 19 gtctagtggttagaattcagcattttcactgctg 52
||||||||||||| |||||||| | |||||||||
Sbjct: 10 gtctagtggttaggattcagcactgtcactgctg 43
>RF00005;tRNA;ABRN01140728.1/11635-11565 :
Length = 71
Score = 44.1 bits (22), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactg 49
||||||||| ||||||||||| ||| ||||||||
Sbjct: 7 gtggtctagcggttagaattcggcactttcactg 40
>RF00005;tRNA;ABRN01440069.1/2379-2450 :
Length = 72
Score = 44.1 bits (22), Expect = 2e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctgg 53
|||||| ||||||||| | || ||||||||||||||||
Sbjct: 7 gtggtccagtggttaggactcggcattttcactgctgg 44
>RF00005;tRNA;AAWR02002591.1/62317-62388 :
Length = 72
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagca 40
|||||||||||||||| ||||||||
Sbjct: 7 gtggtctagtggttaggattcagca 31
>RF00005;tRNA;AAWR02012011.1/62543-62472 :
Length = 72
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||| ||||||||| |||| ||| |||||||||||
Sbjct: 7 gtggtccagtggttaggattcggcactttcactgctg 43
>RF00005;tRNA;CT827800.8/67207-67278 :
Length = 72
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||||||||||| | || ||| |||||||||||
Sbjct: 7 gtggtctagtggttaggactctgcactttcactgctg 43
>RF00005;tRNA;CU459044.14/58344-58414 :
Length = 71
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||| ||||||| ||||| || |||||||||||
Sbjct: 7 gtggtctaatggttaggattcaacagtttcactgctg 43
>RF00005;tRNA;AAFC03084506.1/56901-56830 :
Length = 72
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||||||||||| |||| ||| ||| |||||||
Sbjct: 7 gtggtctagtggttaggattcggcactttgactgctg 43
>RF00005;tRNA;AAFC03012184.1/36419-36491 :
Length = 73
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||||||||||| |||| || |||||||||||
Sbjct: 7 gtggtctagtggttaggattccacactttcactgctg 43
>RF00005;tRNA;AAFC03041490.1/76065-76002 :
Length = 64
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
||||||||||||||| |||| ||| |||||||||||
Sbjct: 3 gtggtctagtggttaagattctgcactttcactgctg 39
>RF00005;tRNA;AAFC03010165.1/16103-16174 :
Length = 72
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||| ||||||||| |||||| | |||||||||||
Sbjct: 7 gtggtccagtggttaggattcagtactttcactgctg 43
>RF00005;tRNA;AAFC03018325.1/32425-32501 :
Length = 77
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagca 40
|||||||||||||||| ||||||||
Sbjct: 7 gtggtctagtggttaggattcagca 31
>RF00005;tRNA;ABRN01175078.1/6250-6321 :
Length = 72
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||||||||||| | ||||| |||||||||||
Sbjct: 7 gtggtctagtggttaggactcagcgctttcactgctg 43
>RF00005;tRNA;ABRN01345071.1/3268-3339 :
Length = 72
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||| ||||||||||| |||| ||| |||||||||||
Sbjct: 7 gtggactagtggttaggattcggcactttcactgctg 43
>RF00005;tRNA;ABRN01415546.1/11614-11686 :
Length = 73
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||||||||||| |||| ||| ||||| |||||
Sbjct: 8 gtggtctagtggttagtattcggcactttcagtgctg 44
>RF00005;tRNA;ABRN01306067.1/5232-5304 :
Length = 73
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||||||||||| | | |||||||||||||||
Sbjct: 7 gtggtctagtggttaggacttggcattttcactgctg 43
>RF00005;tRNA;ABRN01369846.1/4863-4792 :
Length = 72
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||| ||||||||| |||| ||| |||||||||||
Sbjct: 7 gtggtccagtggttaggattctgcactttcactgctg 43
>RF00005;tRNA;ABRN01106494.1/1119-1048 :
Length = 72
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||||||||||||| || || |||||||||||
Sbjct: 7 gtggtctagtggttagaaatctgcgctttcactgctg 43
>RF00005;tRNA;ABRN01369161.1/407-478 :
Length = 72
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||||||| ||| |||||||| | |||||||||
Sbjct: 7 gtggtctagtggctaggattcagcactctcactgctg 43
>RF00005;tRNA;ABRN01357368.1/5681-5610 :
Length = 72
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||||||| ||| ||||||| |||||||||||
Sbjct: 7 gtggtctagtgggtaggattcagcgctttcactgctg 43
>RF00005;tRNA;ABRN01262161.1/6467-6396 :
Length = 72
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattc 36
|||||||||||||||||||||
Sbjct: 7 gtggtctagtggttagaattc 27
>RF00005;tRNA;ABRN01240546.1/9833-9904 :
Length = 72
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||||||||||| |||||| |||||||||||
Sbjct: 7 gtggtctagtggttaggattcagagctttcactgctg 43
>RF00005;tRNA;AAGU02051423.1/566-495 :
Length = 72
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 gtggtctagtggttagaattcagcattttcactgctg 52
|||||||||||||||| |||| ||| | |||||||||
Sbjct: 7 gtggtctagtggttaggattcggcactctcactgctg 43
