miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00245;mir-19;ABPK01045950.1/308-388 57307:Labeotropheus
fuelleborni
Length = 81
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 gctgtgcaaacccatgcaaaactga 75
|||||||||||||||||||||||||
Sbjct: 50 gctgtgcaaacccatgcaaaactga 74
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 cagctttgcggggtgggcagtcagcct 40
||||||||| |||||||||||||||||
Sbjct: 7 cagctttgcagggtgggcagtcagcct 33
>RF00245;mir-19;BAAE01249018.1/744-824 8090:Oryzias latipes
(Japanese medaka)
Length = 81
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 gctgtgcaaacccatgcaaaactga 75
|||||||||||||||||||||||||
Sbjct: 50 gctgtgcaaacccatgcaaaactga 74
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 cagctttgcggggtgggcagtcagcct 40
||||||||| |||||||||||||||||
Sbjct: 7 cagctttgcagggtgggcagtcagcct 33
>RF00245;mir-19;CAAK05029381.1/12427-12502 7955:Danio rerio
(zebrafish)
Length = 76
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 50 cgctgtgcaaacccatgcaaaactga 75
||||||||||| ||||||||||||||
Sbjct: 44 cgctgtgcaaatccatgcaaaactga 69
>RF00245;mir-19;CAAB01003114.1/25012-24940 31033:Takifugu rubripes
Length = 73
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 50 cgctgtgcaaacccatgcaaaactga 75
||||||||||| ||||||||||||||
Sbjct: 41 cgctgtgcaaatccatgcaaaactga 66
