miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00456;mir-34;BX119985.7/114097-114014 7955:Danio rerio
(zebrafish)
Length = 84
Score = 159 bits (80), Expect = 7e-39
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 1 ggggttggtctgtaggcagtgttgttagctgattgtttcatatgaactataatcactaac 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 ggggttggtctgtaggcagtgttgttagctgattgtttcatataaactataatcactaac 60
Query: 61 catactgccaacacaacaacctac 84
||||||||||||||||||||||||
Sbjct: 61 catactgccaacacaacaacctac 84
>RF00456;mir-34;AAWZ01034188.1/4744-4661 28377:Anolis carolinensis
(green anole)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 5 ttggtctgtaggcagtgttgttagctgattgt 36
||||| |||||||||||| |||||||||||||
Sbjct: 5 ttggtttgtaggcagtgtagttagctgattgt 36
>RF00456;mir-34;ABQO011207158.1/502-419 9315:Macropus eugenii
(tammar wallaby)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tgtaggcagtgttgttagctgattgt 36
|||||||||||| |||||||||||||
Sbjct: 11 tgtaggcagtgtagttagctgattgt 36
