miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00445;mir-399;ABIM01002081.1/1084-952 3649:Carica papaya (papaya)
          Length = 133

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 81  aacttgccaaaggagagctgccctgtga 108
           ||||||||||||||||||||||||||||
Sbjct: 99  aacttgccaaaggagagctgccctgtga 126




>RF00445;mir-399;AASG02006945.1/8927-9041 3988:Ricinus communis
           (castor bean)
          Length = 115

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 83  cttgccaaaggagagctgccctgtga 108
           ||||||||||||||||||||||||||
Sbjct: 83  cttgccaaaggagagctgccctgtga 108




>RF00445;mir-399;BABK01105304.1/403-505 34305:Lotus japonicus
          Length = 103

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 81  aacttgccaaaggagagctgccctgtg 107
           ||||||||||||||||| |||||||||
Sbjct: 69  aacttgccaaaggagagttgccctgtg 95