miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00690;MIR408;AC235367.1/71602-71757 3847:Glycine max (soybean)
Length = 156
Score = 161 bits (81), Expect = 5e-39
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 22 aggaagagacaggacaaaggctgggaacaggcagggcacgaatggagctatcaacagaaa 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggaagagacaggacaaaggctgggaacaggcagggcacgaatggagctatcaacagaaa 60
Query: 82 atggtaaagtgagaatgaaag 102
|||||||||||||||||||||
Sbjct: 61 atggtaaagtgagaatgaaag 81
>RF00690;MIR408;AC136840.24/84429-84307 3880:Medicago truncatula
(barrel medic)
Length = 123
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 122 ctgttgtggctacgctcatgcactgcctctttcctggctt 161
||||||||||| | ||||||||||||||||| ||||||||
Sbjct: 67 ctgttgtggctccactcatgcactgcctcttccctggctt 106
>RF00690;MIR408;BABK01104206.1/188-52 34305:Lotus japonicus
Length = 137
Score = 48.1 bits (24), Expect = 5e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 26 agagacaggacaaaggctgggaacaggcagggcacgaatggagctatcaaca 77
||||||| ||||| ||| ||||| |||||| ||| | |||||||||||||||
Sbjct: 5 agagacaagacaatggcagggaagaggcagagcatggatggagctatcaaca 56
