miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00255;mir-218;AANH01004642.1/224-313 69293:Gasterosteus
aculeatus (three-spined stickleback)
Length = 90
Score = 127 bits (64), Expect = 2e-29
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 1 caggaccccattgtgcttgatctaaccatgcagtgcatcgtgtgtccatggttgtgccaa 60
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 8 caggacgccattgtgcttgatctaaccatgcagtgcatcgtctgtccatggttgtgccaa 67
Query: 61 gcaccttggaggcttg 76
|||| |||||||||||
Sbjct: 68 gcactttggaggcttg 83
>RF00255;mir-218;BAAF04032954.1/4818-4909 8090:Oryzias latipes
(Japanese medaka)
Length = 92
Score = 119 bits (60), Expect = 5e-27
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 1 caggaccccattgtgcttgatctaaccatgcagtgcatcgtgtgtccatggttgtgccaa 60
||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||
Sbjct: 10 caggaccccattgtgcttgatctaaccatgcagtggatgctctgtccatggttgtgccaa 69
Query: 61 gcaccttggaggcttg 76
||||||||||||||||
Sbjct: 70 gcaccttggaggcttg 85
