miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00650;mir-153;AAGJ02018792.1/5926-5834 7668:Strongylocentrotus
purpuratus
Length = 93
Score = 184 bits (93), Expect = 1e-46
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 cccgccagcccgatcatttttgtgtttatgcaacttttgtattttcaccgatcagagtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccgccagcccgatcatttttgtgtttatgcaacttttgtattttcaccgatcagagtag 60
Query: 61 ttgcatagtcacaaaagtgattgggagggttgg 93
|||||||||||||||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgattgggagggttgg 93
>RF00650;mir-153;ABRQ01035369.1/2287-2202 9813:Procavia capensis
(cape rock hyrax)
Length = 86
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 50 agttgcatagtcacaaaagtgat 72
>RF00650;mir-153;AAWZ01013157.1/56717-56632 28377:Anolis
carolinensis (green anole)
Length = 86
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 50 agttgcatagtcacaaaagtgat 72
>RF00650;mir-153;ABQF01010730.1/5361-5446 59729:Taeniopygia
guttata
Length = 86
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 50 agttgcatagtcacaaaagtgat 72
>RF00650;mir-153;BAAE01047906.1/23-109 8090:Oryzias latipes
(Japanese medaka)
Length = 87
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 51 agttgcatagtcacaaaagtgat 73
