miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00838;mir-252;AAGJ02031023.1/3179-3073 7668:Strongylocentrotus
purpuratus
Length = 107
Score = 167 bits (84), Expect = 3e-41
Identities = 93/96 (96%)
Strand = Plus / Plus
Query: 6 gtccacgttgccgatctaagtagtagtgccgcaggtactgattataaagtgatacctgta 65
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 11 gtccacgttgccgatctaagtagtagtgccgcaggtactgatttttaagtgatacctgta 70
Query: 66 cacggctacttacattggcaacgagttggaaaatca 101
||||||||||||||||||||||||| ||||||||||
Sbjct: 71 cacggctacttacattggcaacgagctggaaaatca 106
>RF00838;mir-252;AAQA01000035.1/130050-130151 6279:Brugia malayi
Length = 102
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tctaagtagtagtgccgcaggta 42
|||||||||||||||||||||||
Sbjct: 23 tctaagtagtagtgccgcaggta 45
>RF00838;mir-252;ABKE01000496.1/4965-5072 54126:Pristionchus
pacificus
Length = 108
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tctaagtagtagtgccgcaggta 42
|||||||||||||||||||||||
Sbjct: 24 tctaagtagtagtgccgcaggta 46
>RF00838;mir-252;ABIR01001232.1/17830-17935 6334:Trichinella
spiralis
Length = 106
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tctaagtagtagtgccgcaggt 41
||||||||||||||||||||||
Sbjct: 25 tctaagtagtagtgccgcaggt 46
