miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00694;mir-137;AAGJ02120953.1/3113-3013 7668:Strongylocentrotus
purpuratus
Length = 101
Score = 60.0 bits (30), Expect = 6e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 53 cctgatgttattgcttgagaatacacgtag 82
||||||||||||||||||||||||||||||
Sbjct: 53 cctgatgttattgcttgagaatacacgtag 82
>RF00694;mir-137;BAAF04063265.1/5995-5897 8090:Oryzias latipes
(Japanese medaka)
Length = 99
Score = 60.0 bits (30), Expect = 6e-09
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 29 gtattctcgggttgataatacatacct-gatgttattgcttgagaatacacgtagctg 85
||||||| |||||||||||||| | | ||||||||||||||||||||| ||||||||
Sbjct: 26 gtattcttgggttgataatacagatgtcgatgttattgcttgagaatacgcgtagctg 83
>RF00694;mir-137;AAZO01004444.1/55394-55292 121224:Pediculus
humanus corporis (human body louse)
Length = 103
Score = 60.0 bits (30), Expect = 6e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 56 gatgttattgcttgagaatacacgtagctg 85
||||||||||||||||||||||||||||||
Sbjct: 57 gatgttattgcttgagaatacacgtagctg 86
>RF00694;mir-137;BAAB01088495.1/2035-1935 7091:Bombyx mori
(domestic silkworm)
Length = 101
Score = 60.0 bits (30), Expect = 6e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 56 gatgttattgcttgagaatacacgtagctg 85
||||||||||||||||||||||||||||||
Sbjct: 55 gatgttattgcttgagaatacacgtagctg 84
>RF00694;mir-137;AAJJ01002111.1/15264-15166 7070:Tribolium
castaneum (red flour beetle)
Length = 99
Score = 60.0 bits (30), Expect = 6e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 56 gatgttattgcttgagaatacacgtagctg 85
||||||||||||||||||||||||||||||
Sbjct: 55 gatgttattgcttgagaatacacgtagctg 84
>RF00694;mir-137;CAAE01013623.1/560-657 99883:Tetraodon
nigroviridis
Length = 98
Score = 54.0 bits (27), Expect = 4e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 29 gtattctcgggttgataatacatacctg-atgttattgcttgagaatacacgtag 82
||||||| |||||||||||||| | || |||||||||||||||||||| |||||
Sbjct: 26 gtattcttgggttgataatacagatgtggatgttattgcttgagaatacgcgtag 80
>RF00694;mir-137;ABPK01025702.1/584-484 57307:Labeotropheus
fuelleborni
Length = 101
Score = 54.0 bits (27), Expect = 4e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 29 gtattctcgggttgataatacatacctg-atgttattgcttgagaatacacgtag 82
||||||| |||||||||||||| | || |||||||||||||||||||| |||||
Sbjct: 27 gtattcttgggttgataatacagatgtggatgttattgcttgagaatacgcgtag 81
>RF00694;mir-137;BAAF04031315.1/5933-5836 8090:Oryzias latipes
(Japanese medaka)
Length = 98
Score = 54.0 bits (27), Expect = 4e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 29 gtattctcgggttgataatacatacctg-atgttattgcttgagaatacacgtag 82
||||||| |||||||||||||| | || |||||||||||||||||||| |||||
Sbjct: 26 gtattcttgggttgataatacagatatggatgttattgcttgagaatacgcgtag 80
>RF00694;mir-137;AAQB01009904.1/3815-3716 7260:Drosophila
willistoni
Length = 100
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 atgttattgcttgagaatacacgtag 82
||||||||||||||||||||||||||
Sbjct: 57 atgttattgcttgagaatacacgtag 82
>RF00694;mir-137;AAFS01000057.1/187400-187500 46245:Drosophila
pseudoobscura pseudoobscura
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 atgttattgcttgagaatacacgtag 82
||||||||||||||||||||||||||
Sbjct: 56 atgttattgcttgagaatacacgtag 81
>RF00694;mir-137;AAPP01018794.1/261725-261826 7217:Drosophila
ananassae
Length = 102
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 atgttattgcttgagaatacacgtag 82
||||||||||||||||||||||||||
Sbjct: 57 atgttattgcttgagaatacacgtag 82
>RF00694;mir-137;AASR01013769.1/615-715 7240:Drosophila simulans
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 atgttattgcttgagaatacacgtag 82
||||||||||||||||||||||||||
Sbjct: 56 atgttattgcttgagaatacacgtag 81
>RF00694;mir-137;AANI01011213.1/2061-1961 7244:Drosophila virilis
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 atgttattgcttgagaatacacgtag 82
||||||||||||||||||||||||||
Sbjct: 57 atgttattgcttgagaatacacgtag 82
>RF00694;mir-137;AAPU01010131.1/289658-289758 7230:Drosophila
mojavensis
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 atgttattgcttgagaatacacgtag 82
||||||||||||||||||||||||||
Sbjct: 57 atgttattgcttgagaatacacgtag 82
>RF00694;mir-137;AAFR03049204.1/9121-9021 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 101
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtag 82
|||||||||||||||||||||||||
Sbjct: 56 tgttattgcttgagaatacacgtag 80
>RF00694;mir-137;ABLF01001266.1/4970-5069 7029:Acyrthosiphon pisum
(pea aphid)
Length = 100
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtag 82
|||||||||||||||||||||||||
Sbjct: 57 tgttattgcttgagaatacacgtag 81
>RF00694;mir-137;AADG05005118.1/28931-28831 7460:Apis mellifera
(honey bee)
Length = 101
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtag 82
|||||||||||||||||||||||||
Sbjct: 57 tgttattgcttgagaatacacgtag 81
>RF00694;mir-137;AAGE02029705.1/92443-92543 7159:Aedes aegypti
(yellow fever mosquito)
Length = 101
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtag 82
|||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtag 82
>RF00694;mir-137;ABKQ02013341.1/3039-2937 377270:Anopheles gambiae
S
Length = 103
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtag 82
|||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtag 82
>RF00694;mir-137;ABJB010513068.1/3224-3122 6945:Ixodes scapularis
(black-legged tick)
Length = 103
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgt 80
|||||||||||||||||||||||
Sbjct: 59 tgttattgcttgagaatacacgt 81
